Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3828 ATGAGCGACGAATATCTTTCAGGTAGCAGCACTACTACTCCATTCTTACAATCCCAATTTGAGGCCCAATATCATGTCAAAAGAACAGGGACAGTGTGGACGGCAGTGGCGCACATAGTGACGGGAGTGATAGGGTCAGGAGTGTTGTCGTTGGCATGGAGTATTGCACAGATTGGATGGATTGCAGGACCATTAGCGATTCTTTTGTTCGCTTCGGTTACTCTTCTTTCTTCTTTTCTTCTCAGTGATACTTATCGTTCTCCAGATCCTGAATCTGGTCCTCATCGAAGTTCTTCTTACCTTGACGCCGTTAATATGCATAAGGGAGAAGGAAATGGGCGTCTCTGCAGTGTTTTTGTAAATATATGCTTATATGGTTTTGGAATTGCCTACATCATTACAGCATCCATCAGCATAAGATCAATCCAGGAATCAGCATGTCACCATAGCAAAGGAAATGAAGAAACATGCTATGTGAAGGATACATATAACATGCTTGTTTTCGGGGCTATCCAAGTTGTTCTGTCGCAGATACCTAATTTCCGTAACATCGAATGGCTCTCGATTGTTGCAGCAATAATGTCCTTTGGTTATGCTTTCATTGGATTGGGACTTGCCACTGATAAAGTCAATGAAAACGGACATTTTAAGGGTAACATTAGAGGTGTGCCAACTTCGACCGGAATGGAAAAAGTATGGCTGGTTGCACAAGCACTTGGTGACATAGCCTTCTCGTATCCATTTTCAGTGATTCTTATAGAAATTCAGGACACTCTGAAATCGCCTCCAGCGGAAAACGTAACCATGAGAAGGGCCTCAACGATATCGGTTATCATCACAACAACGTTTTACCTCTGTTGCGGCTGTGCTGGTTATGCAGCTTTTGGTAATGACACACCAGGAAATCTTTTAACCGGCTTTGCAAGTTATAAGCTTTATTGGCTTGTAGATTTCGCCAATGCTTGTATAGTTATTCACCTAGTTGGTGCATACCAGGTGTATAGCCAGCCACTTTACGCGAATGTTGAGAATTGGTTACGTTTTAGATTTCCAGATAGTGGATTTGTGAATTACGCGTACGACTTAAAACTACCATTGCTACCGAATTTTCAACTAAGTCCACTAAGGCTTTGTTTCCGAACTTTTTATGTTGCGACGACGACCGTGATTGCGATGCTCTTTCCATATTTCAACCAGATTTTGGGAGTTTTGGCTGGCATAATATATTATCCATTAACCATATATTTCCCAGTGGAAATGTATATTAGTCAGTGCAACATTGAACCATGGACAAGCAAGTGGATTTGGCTTAGGACTTTTAGCATTGTTGGCTTTGTGGTGGGAGCTTTCACTCTCATTGGATCCATTCAAGGAATAATATCTGCAAAACTAAGCTGA 1398 0.417 MSDEYLSGSSTTTPFLQSQFEAQYHVKRTGTVWTAVAHIVTGVIGSGVLSLAWSIAQIGWIAGPLAILLFASVTLLSSFLLSDTYRSPDPESGPHRSSSYLDAVNMHKGEGNGRLCSVFVNICLYGFGIAYIITASISIRSIQESACHHSKGNEETCYVKDTYNMLVFGAIQVVLSQIPNFRNIEWLSIVAAIMSFGYAFIGLGLATDKVNENGHFKGNIRGVPTSTGMEKVWLVAQALGDIAFSYPFSVILIEIQDTLKSPPAENVTMRRASTISVIITTTFYLCCGCAGYAAFGNDTPGNLLTGFASYKLYWLVDFANACIVIHLVGAYQVYSQPLYANVENWLRFRFPDSGFVNYAYDLKLPLLPNFQLSPLRLCFRTFYVATTTVIAMLFPYFNQILGVLAGIIYYPLTIYFPVEMYISQCNIEPWTSKWIWLRTFSIVGFVVGAFTLIGSIQGIISAKLS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3828 465 PANTHER OS05G0424000 PROTEIN-RELATED 13 464 - -
Psa5g3828 465 Gene3D Amino acid/polyamine transporter I 25 341 - -
Psa5g3828 465 Pfam Transmembrane amino acid transporter protein 28 460 IPR013057 -
Psa5g3828 465 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 13 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3828 Psa-Chr5 301463704 301468262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3828 20 460 Organic Solute Cotransporters AT5G09220 49.324 2.88e-159 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3828 K24917 - gmx:100801302 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0128 2 4889598 4892415 Psa5g3828 5 301463704 301468262 PCT