Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3815 ATGGAAACTTGGATAATGATGGATGTGAAAAACTCTCGACAAATAACAACAACTGCTCCTGATGCTTATGATGATGATGGACGTGCCAAAAGGACTGGAAATCTGAAAAGTGCTGTGGCTCATATCATCACAGCTATTATTGGGTCTGGTGTTTTGTCCTTGGCGTGGAGTATTGCTCAATTAGGATGGATTGGAGGGCCACTTGCCTTGCTTTGTTGTGCAATAGCTACCTATATTTCTTCAATCATTTTGTCTGATTGTTACAGAAGTCCTGACCCGGTAACTGGGAAAAGAAACTACTCTTATATCGATGCTGTTAGAGTCAATCTTGGTATGAAAAGAACATATGTGGCTGGTTTCCTTCAATTCTTGAGCTTGTATGTCACTTCTATTGCCTATGTAATAACCACAGGGACCAGTTTGAGGGCTATTTTGAAATCAAATTGTTATCACAAATTAGGACATGACGCTCCTTGTAGTTACGGTGGTAATTTATATATGGGGCTGTTTGGACTTGTTGAGATTGTAATGTCATTCATACCGGATCTCCATAACATGGCTTGGGTTTCAGTTATTGCCGCAATAATGTCATTTTCATACTCATTGATTGGACTGGGACTTGGCATAGCAACAATCATAAAAAATGGAAGAATTATGGGAAGTTTGACAGGAGTACAAACTGCTAATATTGCTGACAAAATCTGGTTAATCTTCCAGGCAATTGGTGACATTAGCTTTTCCTATCCATACCCAATGCTCCTTCTTGAGATACAGGACACTCTAGAGTCTCCTCCATCAGAGAATCAAACCATGAAAAAGGCCTCCGTGACTTCACTCGTCATTACAACATTCTTCTGCCTATGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATGATGCGCCAGGAAATCTATTGACAGGGTTTGGATTTTACGAGCCTTTCTGGCTTATTGACTTTGCCAATGTTTGTATTATCATTCATTTGGTTGGAGGATATCAGATATACAGTCAACCAATATATAGTGCTGCTGATAGATGGTGTTCAAAAAAATTTCCCAAGAGTGGCTTTGTGAATGATTTCCACATAGTGAAACTCCCTCTATTACCGGCTTTTAAGATAAATCTTTACAGGTTTTGTTTTAGAACAATCTACGTGATTTCAACCGCTGGACTTGCAATTTTATTCCCTTACTTCAACCAAGTTCTTGGAGTTTTAGGAGGCATAAATTTCTGGCCATTGGCTATATATTTCCCAGTTGAGATGTACTTTGTACAGATGAAAATTGGAGCTTGGACTAAAAAATGGATTGTTCTGAGGATATTTAGCTTTGCATGCTTTCTTGTCACAATGGTAGGATTAATTGGATCACTTGAAGGAATCATACGTGAGAAACTCAAGTAA 1404 0.3882 METWIMMDVKNSRQITTTAPDAYDDDGRAKRTGNLKSAVAHIITAIIGSGVLSLAWSIAQLGWIGGPLALLCCAIATYISSIILSDCYRSPDPVTGKRNYSYIDAVRVNLGMKRTYVAGFLQFLSLYVTSIAYVITTGTSLRAILKSNCYHKLGHDAPCSYGGNLYMGLFGLVEIVMSFIPDLHNMAWVSVIAAIMSFSYSLIGLGLGIATIIKNGRIMGSLTGVQTANIADKIWLIFQAIGDISFSYPYPMLLLEIQDTLESPPSENQTMKKASVTSLVITTFFCLCCGCFGYAAFGNDAPGNLLTGFGFYEPFWLIDFANVCIIIHLVGGYQIYSQPIYSAADRWCSKKFPKSGFVNDFHIVKLPLLPAFKINLYRFCFRTIYVISTAGLAILFPYFNQVLGVLGGINFWPLAIYFPVEMYFVQMKIGAWTKKWIVLRIFSFACFLVTMVGLIGSLEGIIREKLK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3815 467 PANTHER OS05G0424000 PROTEIN-RELATED 11 466 - -
Psa5g3815 467 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 11 466 - -
Psa5g3815 467 Pfam Transmembrane amino acid transporter protein 32 462 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3815 Psa-Chr5 300752453 300756012 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3815 6 464 Organic Solute Cotransporters AT1G10010 49.142 1.20e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3815 K24917 - gmx:100781077 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3815 5 300752453 300756012 Psa2g0128 2 4889598 4892415 PCT