Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3694 ATGAGAAAAACCACAACCATTATTTCATCATTTGCAATTCACATTCTTCTTCTTATTTCTTCTATTCCCTTCTCATCCTCCCAACCCAATGAAAAAAACAGCACCACCGATTTAATAGACCAAATATGTAAAAAAACACCTTTCTACGACCTATGCAGTTCAATCCTAAACTCCACCCCACCGACCCCAAAACCCGATCTAAAAACCGTAGCCCTAGTAATGGTAAACAACATTCTCTCAAACGCAACCGACACACTAAACTTCATCGAAGCATTGATCAAGAAAACCTCAGATCGTGAAATGGAACAAGCATTGGCTTTCTGTGCTGAATCATATATCCCTGTTGTGAAGTACACTCTTCCTCAGGCTGCTGATGCCATTAGCCAAAACCGTTTTGGGTTTGCTGGTTACTGTGTTTCTGATGCTGTCAAAGAAGTTAACTCTTGTAATAAGAAGTTTTCAGGGTTGTTGTTGTCACCTTTGGGGGATAGAAATGGGATTGTTCAGAAGCTTGTGGATGTGGCTTCTGCTATTATTAAACAACTTTTGAAGGGTTGA 558 0.3996 MRKTTTIISSFAIHILLLISSIPFSSSQPNEKNSTTDLIDQICKKTPFYDLCSSILNSTPPTPKPDLKTVALVMVNNILSNATDTLNFIEALIKKTSDREMEQALAFCAESYIPVVKYTLPQAADAISQNRFGFAGYCVSDAVKEVNSCNKKFSGLLLSPLGDRNGIVQKLVDVASAIIKQLLKG* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3694 185 Pfam Plant invertase/pectin methylesterase inhibitor 37 178 IPR006501 GO:0004857
Psa1g3694 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 182 IPR035513 -
Psa1g3694 185 CDD CIF_like 36 182 IPR034087 GO:0004857|GO:0043086
Psa1g3694 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 183 IPR035513 -
Psa1g3694 185 SMART PMEI_2 34 178 IPR006501 GO:0004857
Psa1g3694 185 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 182 IPR006501 GO:0004857
Psa1g3694 185 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 11 185 - -
Psa1g3694 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3694 Psa-Chr1 310909138 310909983 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3694 - - gmx:100791177 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0508 4 31746483 31747165 Psa1g3694 1 310909138 310909983 PCT
Psa1g3694 1 310909138 310909983 Psa4g0499 4 30545678 30546567 PCT