Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0499 ATGTTGAAGCCATTGGTATCATTTATTCTCATCTTCTGCACCACTCTTATTGTCACTCAATCCCAAGTTATTCAACCAAATAGTGCCAATATTGTACAACAAACTTGCAGTAAGACTCCATATCCTGCACTATGCATTCAATACCTAAATGCTGACCCAAAAAGCTCCACCTCAAATGTCAATGGTTTAGCACTAATCATGATCAATGTAATAAAGAACAATGCAAACGTTGCCATAAACAAAATCAATCAACTTAGTAAAAGTATTCCTACAAAACAAAAGGAGGCACTTCTGTTTTGTAGTATTAATTACACTTCAATTTTGGTTGATGTTTTTCAAGCAACTCAAGCTTTGCAAAAAGGAAACCCAAAATTTGCAGTATATAATGTAAATAGTGTTGCTTCTGAAGCCAATGGTTGTGAAAATGAATTCTCTGAAAAATCACCACTCACAGCTGAAAATAATGTAATGCATGATGCATCGGCAATAACATCGGCTATTTGTAGATTATTGCTCTAA 519 0.343 MLKPLVSFILIFCTTLIVTQSQVIQPNSANIVQQTCSKTPYPALCIQYLNADPKSSTSNVNGLALIMINVIKNNANVAINKINQLSKSIPTKQKEALLFCSINYTSILVDVFQATQALQKGNPKFAVYNVNSVASEANGCENEFSEKSPLTAENNVMHDASAITSAICRLLL* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0499 172 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 172 - -
Psa4g0499 172 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 170 IPR006501 GO:0004857
Psa4g0499 172 SMART PMEI_2 27 167 IPR006501 GO:0004857
Psa4g0499 172 Pfam Plant invertase/pectin methylesterase inhibitor 31 166 IPR006501 GO:0004857
Psa4g0499 172 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 171 IPR035513 -
Psa4g0499 172 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 172 IPR035513 -
Psa4g0499 172 CDD CIF_like 29 171 IPR034087 GO:0004857|GO:0043086
Psa4g0499 172 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 14 172 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0499 - - gmx:100306719 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0499 4 30545678 30546567 Psa4g0499 4 30545678 30546567 ECH
Psa1g3694 1 310909138 310909983 Psa4g0499 4 30545678 30546567 PCT