Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0508 ATGAAAAAACCCTCAACCTCTATGTCATTTTTTCAAATTATTCTCTTTTCTTGTTTTTTTCTCCAACTCACACAGTCCTCTACTCAAATGAATGATGCAGTTCTTGATGATCTGGTGGATGACATATGCAAAAAGACACCAAATTTTGACCTATGCAGCTCAACAATACATTCCAATCCTCAAGCAGCCAAAAGTGATGCAAATGGTATAGCAGTCATTATGATTAATGACATTCTACAAAGTGTCACTAACACATTGAGCTTTATACAAGGTCTTGTTAAAGAAACCAAAGATCTTGAATTGCAAAGAAAGTATGCTATTTGTGCTGAGACATATATTCCATTAGAGAAAACCGTTCTTCCACAAGCAGTTGATGGAATAAACAAGAAAAAAAACTATGGACTTGCCATTTACTCTATGGGTTATACTGGAAAGGAAATTGATTCTTGCAACAAGCAATTCTCAAATGCTTCACCTTTAGGTGATAAGACTAATAATTTACATAAATTGCTTGATATTGGTTCAGCCATTTTAAAACTATTATTAAAAGGGTGA 555 0.3351 MKKPSTSMSFFQIILFSCFFLQLTQSSTQMNDAVLDDLVDDICKKTPNFDLCSSTIHSNPQAAKSDANGIAVIMINDILQSVTNTLSFIQGLVKETKDLELQRKYAICAETYIPLEKTVLPQAVDGINKKKNYGLAIYSMGYTGKEIDSCNKQFSNASPLGDKTNNLHKLLDIGSAILKLLLKG* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0508 184 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 9 184 - -
Psa4g0508 184 CDD CIF_like 42 181 IPR034087 GO:0004857|GO:0043086
Psa4g0508 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 181 IPR006501 GO:0004857
Psa4g0508 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 184 - -
Psa4g0508 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 182 IPR035513 -
Psa4g0508 184 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Psa4g0508 184 SMART PMEI_2 34 177 IPR006501 GO:0004857
Psa4g0508 184 Pfam Plant invertase/pectin methylesterase inhibitor 37 175 IPR006501 GO:0004857
Psa4g0508 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 181 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0508 Psa-Chr4 31746483 31747165 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0508 - - mtr:MTR_4g122720 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0508 4 31746483 31747165 Psa1g3694 1 310909138 310909983 PCT