Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2910 ATGGATCGGCTTTCATCCACCACTATTCTGCCGGATGCGTTTCAAGGGGTCAGAGACGACATTGCCCTGCAAATTGGGTTGATTTGGAGTCAAATCAAGGCCCCATTGATCGTTCCGCTCCTGAGAATAGCAGTGGCTCTGTGCTTGATCATGTCCTTATTGTTGTTCTTCGAGAGGGTGTACATGGGTCTCGTTATCACATTCGTCAAACTACTCGGGAGAAAACCAGAGAAGCGTTACAAATGGGAGGCAATGAAGGACGACGTAGAGCTGGGGAACTCAGCTTACCCGATGGTTCTTGTTCAAATCCCGATGTACAACGAAAGAGAGGTTTATCATCTATCCATTGGAGCAGCTTGTGGGCTGTCGTGGCCTTCCGATAGGATCATAATACAAGTTCTGGACGATTCCACCGACCCCACGATTAAGAGCATGGTGGAGATGGAATGCAAGAGATGGGCGAGCAAAGGCATAAGCATAAAGTACGAGATCAGGGACAACAGAAACGGGTACAAAGCAGGGGCTCTGAAAGAAGGGATGAAGCGAAGCTACGTGAAGCAGTGTGACTACGTTGCCATTTTGGACGCAGATTTTCAACCAGAGCCTGATTTCCTCTGGCGCACCATCCCTTTCCTCCTCCATAATCGCCAGCTAGCCCTCGTTCAGGCTCGCTGGAAGTTCGTGAATTCGGACGAGTGTTTGATGACAAGGATGCAGGAGATGTCGCTGGATTATCATTTTACGGTGGAACAAGAAGTGGGGTCTTCCACCTATGCCTTCTTCGGATTTAACGGGACTGCGGGAGTATGGAGGATCTCGGCTCTGAATGAGGCTGGTGGCTGGAAGGATAGGACCACCGTGGAAGACATGGACCTCGCCGTGAGAGCCAGTCTTAAAGGCTGGAAATTCCTCTACTTAAGCAATTTACAGGTTAAAAACGAACTTCCAAGCACTTTCAAGGCGTATCGCTACCAACAGCATCGTTGGTCTTGTGGACCGGCCAATCTTTTCAGGAAAATGGTTTGGGAGATTATGACAAACAAGAAAGTGTCCTTGTGGAAGAAGATCTATGTGATTTACAGCTTCTTTTTTGTTCGGAAAGTCATAGCCCACATCAACACTTTCATATTCTATTGCGCAGTACTGCCTGCAACTGTTGTGGTGCCCGAGGTCGTGGTCCCCAAGTGGGGAGCTGTCTATATCCCTTCCATCATCACCCTTCTTAATGCAGTTGGAACTCCTAGGTCACTGCACTTACTAGTGTTCTGGATTCTGTTTGAGAATGTCATGTCTCTACACCGAACAAAGGCAACAATTATTGGTCTGCTAGAGGCAAGTCGAGTGAATGAATGGATTGTCACTGAAAAACTTGGAGATGCTCTCAAAGCTAAAGTAGGCACTAAAACGTCCAAGAAGCCTCGCTTTCGGATTGGAGACAGGCTTCACTTGTTAGAGCTTGGAGTCGGATTTTACCTCTTCTTCTGTGGGTGCTATGATTTCCTGTTCGGGAAAAATCATTACTTCATATTCCTTTATATCCAAGCAGTTGCCTTCTTCATCATGGCGTTTGGATATGTAGGCACCTTTGTTCCAAACTCGTAG 1602 0.4732 MDRLSSTTILPDAFQGVRDDIALQIGLIWSQIKAPLIVPLLRIAVALCLIMSLLLFFERVYMGLVITFVKLLGRKPEKRYKWEAMKDDVELGNSAYPMVLVQIPMYNEREVYHLSIGAACGLSWPSDRIIIQVLDDSTDPTIKSMVEMECKRWASKGISIKYEIRDNRNGYKAGALKEGMKRSYVKQCDYVAILDADFQPEPDFLWRTIPFLLHNRQLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLQVKNELPSTFKAYRYQQHRWSCGPANLFRKMVWEIMTNKKVSLWKKIYVIYSFFFVRKVIAHINTFIFYCAVLPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKAKVGTKTSKKPRFRIGDRLHLLELGVGFYLFFCGCYDFLFGKNHYFIFLYIQAVAFFIMAFGYVGTFVPNS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2910 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 314 IPR029044 -
Prci3g2910 533 Pfam Glycosyl transferase family group 2 190 387 IPR001173 -
Prci3g2910 533 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Prci3g2910 533 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 528 - -
Prci3g2910 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 376 IPR029044 -
Prci3g2910 533 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2910 Prci-Chr3 40786574 40790969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2910 1 532 Miscellaneous Gene Families AT5G03760 80.488 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2910 K13680 - zju:107432151 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0250 1 2275693 2281275 Prci3g2910 3 40786574 40790969 CCT
Prci3g2910 3 40786574 40790969 Prci6g0549 6 3587788 3592429 ECH
Prci3g2910 3 40786574 40790969 Prci3g2910 3 40786574 40790969 ECH