Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0250 ATGGATCTCACGATAATGGATTCATCAGTTTCAGCAATGGGGACGATGTGGGAGAAAACTAGGGTTCCTGTGATCGTTCCAGGGTTGAAGGTGATGGTGATGGTTTGCCTCGCCATGTCCGTGATGCTGTTTGTGGAGAGAGTGTATATGGGAATAGTAATAGTGATGGTCAAGTCGTTCGGACTCTGCAACCCTAAGAAGCGTTACAAGTGGGAGGCACTGAAGCAAGACGACGATGTTGAGCTTGGCAGCAGCTCGGCTTACCCTATGGTGCTCGTTCAAATTCCGATGTACAATGAGATTGAGGTGTACAAGCTGTCAATAGGAACAGCATGCGGGCTATCATGGCCGGCTGACAGGATCATCATTCAAGTTCTGGATGACTCCACTGATCCTCTCATCAAGGACATGGTGGAAACGGAGTGCAAGAGATGGGAGAGCAAAGGCATCAACATCAAGTATGAGATCAGAGAGAACAGAAGAGGCTACAAAGCAGGAGCCCTCAAGGAAGGCATGAAGCATCCCTACGTCCATCTCTGTGACTACGTCGCCATCTTTGACGCCGACTTCCAACCTCAACCCGACTTCCTCCTCCGCACCCTTCCCTTCCTCATCCACAACCCTCAACTTGCTCTCCTCCAAGCTCGCTGGACTTTCGTAAATGCTGATGAATGCTTGATGACAAGAATGCAACAGATGTCACTGGATTACCATTTCAAAGTTGAGCAGGAAGTTGGATCCTCTACCTACGCTTTCTTTGGTTTCAATGGCACAGCTGGTGTCTGGAGGCTTTCTGCACTCAATGAGGCAGGAGGATGGAAGGACAGAACAACCGTCGAAGACATGGACTTGGCCGTCCGAGCAGGTCTCAAGGGCTGGAAATTTTTATACCTCGGTGACCTTCAGGTGAAAAATGAATTGCCAAGTACATTCAAAGCCTACCGTTATCAACAACACCGATGGTCTTGTGGGCCAGCTAATCTCTTCAGGAAAATGGCCTTGGAAATCATAAGAAACAAGAAAGTATCTATGTGGAAGAAGTTCTATGTGATTTATAGCTTTTTCTTTGTCAGAAAGATCATAGCCCATGTGGTAACATTTTTGTTCTACTGTGTTGTTCTGCCTGCAACTGTTCTTGTTCCTGAAGTGGAAGTTCCAAAGTGGGGTGCCGTGTATATACCTTCCATCATTACTCTGCTTAATGCTGTGGGAACTCCAAGATCACTCCACCTATTGGTATTCTGGGTCCTCTTTGAAAATGTCATGTCAATGCATCGGACTAAGGCAACGCTCATAGGTTTGCTGGAGGCAGGGCGAGCAAATGAATGGGTGGTCACTGAGAAATTGGGAGATTCTCTTAAAACAAAATCAGGAGGCAAAGCACCAAGGAAGCCATATGCCTCATTTGGTGAAAGAATCAATTTGCTCGAACTTGGCATTGGGGCCTACCTCTTCATCTGTGGATGCTACGACCTAGCCTTTGGGAAGAATAGGTACTTCATATACCTCTTCCTGCAATCTCTTGCCTTCTTTATCGCAGGGGTTGGCTACATTGGTGTCTTTGTTGCCAATTCTTAG 1578 0.4689 MDLTIMDSSVSAMGTMWEKTRVPVIVPGLKVMVMVCLAMSVMLFVERVYMGIVIVMVKSFGLCNPKKRYKWEALKQDDDVELGSSSAYPMVLVQIPMYNEIEVYKLSIGTACGLSWPADRIIIQVLDDSTDPLIKDMVETECKRWESKGINIKYEIRENRRGYKAGALKEGMKHPYVHLCDYVAIFDADFQPQPDFLLRTLPFLIHNPQLALLQARWTFVNADECLMTRMQQMSLDYHFKVEQEVGSSTYAFFGFNGTAGVWRLSALNEAGGWKDRTTVEDMDLAVRAGLKGWKFLYLGDLQVKNELPSTFKAYRYQQHRWSCGPANLFRKMALEIIRNKKVSMWKKFYVIYSFFFVRKIIAHVVTFLFYCVVLPATVLVPEVEVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWVLFENVMSMHRTKATLIGLLEAGRANEWVVTEKLGDSLKTKSGGKAPRKPYASFGERINLLELGIGAYLFICGCYDLAFGKNRYFIYLFLQSLAFFIAGVGYIGVFVANS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0250 525 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 11 519 - -
Prci1g0250 525 Pfam Glycosyl transferase family group 2 182 377 IPR001173 -
Prci1g0250 525 FunFam Glucomannan 4-beta-mannosyltransferase 9 79 308 - -
Prci1g0250 525 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 82 308 IPR029044 -
Prci1g0250 525 SUPERFAMILY Nucleotide-diphospho-sugar transferases 86 368 IPR029044 -
Prci1g0250 525 CDD CESA_CaSu_A2 89 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0250 Prci-Chr1 2275693 2281275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0250 7 524 Miscellaneous Gene Families AT5G03760 74.952 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0250 K13680 - mof:131165604 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0250 1 2275693 2281275 Prci3g2910 3 40786574 40790969 CCT
Prci1g0250 1 2275693 2281275 Prci6g0549 6 3587788 3592429 ECH
Prci1g0250 1 2275693 2281275 Prci1g0250 1 2275693 2281275 ECH