Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2204 ATGGACTTAATCACAAGCATGGTAGCAGAGAAGCCAGTGGTAATATTCAGCAAGACCAGCTGTTGCTTGAGCTACTCCATCAAGTCACTCATAAGCGGTTTTGGGGCTCATGCCACTGTGTATGAGATCGATCAAATAAGCAATGGGATGCAGATAGAAAGGGAATTGATTGAATTGGGATGTCAACCAAGTGTACCTGCTGTGTTCATAGGCCAAAAGTTCATTGGTGGTGCCAACCATATCATGAGTCTCCATGTCCGGAACGAGTTAGTGACTCTGCTCATGAATGCCAAAGCCATTTGGATTTGGAACAAAAAGTGA 321 0.4424 MDLITSMVAEKPVVIFSKTSCCLSYSIKSLISGFGAHATVYEIDQISNGMQIERELIELGCQPSVPAVFIGQKFIGGANHIMSLHVRNELVTLLMNAKAIWIWNKK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2204 106 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Prci1g2204 106 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Prci1g2204 106 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Prci1g2204 106 NCBIfam glutaredoxin-like family 5 102 IPR011905 -
Prci1g2204 106 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
Prci1g2204 106 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Prci1g2204 106 CDD GRX_GRXh_1_2_like 12 93 - -
Prci1g2204 106 Gene3D Glutaredoxin 2 106 - -
Prci1g2204 106 Pfam Glutaredoxin 13 75 IPR002109 -
Prci1g2204 106 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2204 Prci-Chr1 42760092 42760681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2204 1 102 Miscellaneous Gene Families AT4G15690 50.980 4.09e-37 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2204 K03676 - pcin:129305727 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2204 1 42760092 42760681 Prci3g3397 3 44442810 44446492 CCT
Prci3g3395 3 44438452 44439445 Prci1g2204 1 42760092 42760681 CCT