Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3397 ATGGACAGAGTGAGAGATTTGGCATCGAACAAGGCTGCTGTGATATTCACCAAGAGCTCGTGTTGCATGTGCCACAGCATCAAGCAACTGTTCTATGAGCTGGGAGCCAGCCCAGCAGTGCACGAGCTCGACACTGATGCGTATGGGAGAGAAATGGAGAGGGCTCTGAGAGGCATGGGCTGTAACCCTTCAGTTCCAGCAGTCTTCATTGGAGGAAAATTCGTGGGCTCGGCCAAAGATATCATATCCCTCCACGTCGACGGCTCTCTCAAACAGATGCTTATAAATGCCAAGGCCATATGGTTTTAA 309 0.5049 MDRVRDLASNKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDTDAYGREMERALRGMGCNPSVPAVFIGGKFVGSAKDIISLHVDGSLKQMLINAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3397 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Prci3g3397 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Prci3g3397 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Prci3g3397 102 CDD GRX_GRXh_1_2_like 12 93 - -
Prci3g3397 102 Pfam Glutaredoxin 14 75 IPR002109 -
Prci3g3397 102 NCBIfam glutaredoxin-like family 4 101 IPR011905 -
Prci3g3397 102 Gene3D Glutaredoxin 1 101 - -
Prci3g3397 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Prci3g3397 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Prci3g3397 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3397 Prci-Chr3 44442810 44446492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3397 1 102 Miscellaneous Gene Families AT4G15700 49.020 3.89e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3397 K03676 - gmx:100788094 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2204 1 42760092 42760681 Prci3g3397 3 44442810 44446492 CCT
Prci3g3397 3 44442810 44446492 Prci1g2202 1 42749201 42750024 CCT
Prci3g3397 3 44442810 44446492 Prci3g3397 3 44442810 44446492 ECH