Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3395 ATGGACAAGGTGATGAGGCTGGCATCAGAAAATCGGGTAGTGATATTCAGCAAGAGCTCTTGCTGCCTGTGCTATGCGGTGAAGATTCTGTTCCAGGAGCTGAAGGCAAACCCTGAGGTTCATGAAATCGACCAAGAGCCTGAAGGCAGGGAAATGGAGAAAGCCCTACTGAGGCTGGGCTGTCCTGCTCCTGTCCCGGCCGTTTTCATCGGAGGGAAGCTCGTGGGGTCCACCAACGAAGTTATGTCCCTCCACCTAAGCGGCCAGCTCGCTCAACTCCTCAAAACTCCTCAATCGATCTCTTGA 306 0.5359 MDKVMRLASENRVVIFSKSSCCLCYAVKILFQELKANPEVHEIDQEPEGREMEKALLRLGCPAPVPAVFIGGKLVGSTNEVMSLHLSGQLAQLLKTPQSIS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3395 101 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Prci3g3395 101 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Prci3g3395 101 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Prci3g3395 101 NCBIfam glutaredoxin-like family 4 99 IPR011905 -
Prci3g3395 101 FunFam Glutaredoxin family protein 1 101 - -
Prci3g3395 101 CDD GRX_GRXh_1_2_like 12 93 - -
Prci3g3395 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Prci3g3395 101 Gene3D Glutaredoxin 1 100 - -
Prci3g3395 101 PANTHER GLUTAREDOXIN 1 98 IPR011905 -
Prci3g3395 101 Pfam Glutaredoxin 13 75 IPR002109 -
Prci3g3395 101 SUPERFAMILY Thioredoxin-like 1 95 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3395 Prci-Chr3 44438452 44439445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3395 1 95 Miscellaneous Gene Families AT4G15670 50.526 2.71e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3395 K03676 - gmx:100499748 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3395 3 44438452 44439445 Prci1g2204 1 42760092 42760681 CCT
Prci3g3395 3 44438452 44439445 Prci3g3395 3 44438452 44439445 ECH