Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02856 ATGTGGTACTGTGTTTGCCGTGTACCAAAATGGGGGAATAGCACAAAAGAATTGAAGAAAGGTACCCCTTGTCCAGTCATGGCTTCAAGATCATATGCTAATCTGCTTGACTTGGCTAGTGGGGACTTGCTTGATATTCCGCGCACTCCAAGAGCTCTTCCAAGGGTTATGACCATTCCTGGAATTATTTCTGACCTGGATGGTTATGGTTGTAATGATGGTGATTCAGATGTTAGCTCTTCTGGATATAGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCATTGCAGGCTAAAAGAGATATAGAAACTGCTAAATGGGTCTTCAGTTGGGATGAAGATTCAATTTTATTACAGTTAAAAGATGGTTTTTCTTCTGATACCGAAGTAATCTATGTGGGTTCTCTCAAGGTTGAAATAGATCTCTGTGAGCAGGATGCAGTTGCTCAGAGATTGCTGGATGAATTTAATTGTGTACCTACCTTTCTTCCCCATGATCTCCAGAAGAAGTTCTACCTTGGCTTTTGTAAGCAGCAACTTTGGCCTCTCTTTCATTATATGTTACCCATATGTCCAGATCACGGTGATCGCTTTGACCGTACACTTTGGCAGGCCTATGTTTCTGCGAACAAAGTATTTGCAGACAAGGTCATGGAAGTAATTAATCCCGATGATGATTTTGTTTGGGTTCATGACTATCACTTAATGGTTTTGCCTACTTTCTTGAGGAAGCGATATAATCAGGTTAAACTTGGATTCTTTCTGCATAGTCCTTTCCCTTCATCTGAAATCTACCGAACTTTACCAGTAAGGGATGAAATTTTGAGGGGATTGTTGAACTCTGATTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGAGGACATATAGGGCTTGATTACTTTGGCCGCACTATTTTTATTAAAATTTCACCTGTAGGCATTCACATGGGTAGACTTGAATCTGTATTAAATCTTTCTTCTACATCTGCTAAACTGAAAGAGGTTCAGGAAGAGTTTAAGGGTAAGAAAGTAATTCTTGGTGTTGATGACATGGATATTTTTAAGGGCATTAGTCTGAAACTTCTAGCCGTGGAACATCTGCTGCAGCAGAATTCAGATTTGCGGGGCAAAGTTGTCCTAGTTCAAATTGTAAATCCTGCAAGGGGCTTTGGGAAGGATGTTCAAGAAGCAAAGAATGAAACATATTTAATTGCCAGGAGGATCAATGATACATATAGCAAAAATAATTATCAGCCAGTTATTCTCATTGACCGACCTGTTCCTCGCTTTGAGAAGAGTGCATATTATGCTGTAGCAGAATGTTGCATTGTCAATGCTGTAAGGGATGGTATGAACTTAGTTCCATACAAATATATAGTCTGCAGACAGGGAACTGCACGACTAGATGAATCATTGGGTAGAAAAAGTGATTCTCCTCGGACAAGCATGCTTGTTGTATCTGAGTTCATTGGTTGTTCACCTTCTCTTAGTGGAGCAATAAGGGTCAATCCCTGGGACATAGATGCCGTAGCCGATGCTATGTATGCTGCCCTTACCATGAGTGATTCAGAGAAGCAGTTGCGCCACGAGAAGCACTATAGGTATGTCAGTTCTCATGATGTGGCATATTGGGCAAATAGCTTTATGCAGGATTTGGAGAGAGCGTGCATAGATCATTACACCAAAAGATGCTGGGGATTTGGTTTGGGCTTGGGGTTCAGAGTTGTTTCTCTTTCTCATGGTTTTAGGAAGTTGACGATTGACCATGTTGTTTCAGCATACAAGAGAACCAATAGAAGGGCCATCTTTCTTGATTATGATGGTACAGTTGTACCACAATCTTCCATCAGTAAAGTCCCCAGCCCTGAAGTCATCTCCGTCTTAAATGCTCTTTGTAATGATCCCAAGAATATTGTGTTCATTGTTAGTGGGAGGGGAAGGGATTCACTGAGTGACTGGTTTACTTCATGCCAAATGCTGGGACTTGCAGCAGAACATGGGTACTTCTTACGGTGGAACAAAGATTCAGAATGGGAAGCAAGTCATTTGTCTGCAGATCTGGATTGGAAAAAGATAGTGGAACCTGTCATGCAGTTGTATACAGAAGCAACTGATGGTTCTAATATTGAAATTAAGGAAAGTGGTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAAGAATTGTTGAATCACTTGGAAAGTGTGCTTGCTAATGAACCAGCAGTTGTTACGAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAATAAGCAAGGGTTGGGTAGCCGAAGAGGTTCTTCAGACCATGGTTAACAGTAATCCACCAGACTTTGTACTGTGCATAGGAGATGATAGGTCTGATGAGGACATGTTTGAGACCATTTTGAGGACGGTATCATTGCCATCAGCTCCAGAGATCTTTGCCTGCACTGTAGGTAGGAAGCCTAGCAAGGCCAAGTATTTTCTTGATGATACTGGTGATGTAGTAAAGTTGCTTCAAGGCCTTGCTGCTTCATCCAATCCAAAACCCAGGCATCTTGCTCACTTTCAGGTCTCCTTTGAGAGCTCAGTTTGA 2652 0.417 MWYCVCRVPKWGNSTKELKKGTPCPVMASRSYANLLDLASGDLLDIPRTPRALPRVMTIPGIISDLDGYGCNDGDSDVSSSGYRERKIIVANMLPLQAKRDIETAKWVFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDLCEQDAVAQRLLDEFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPICPDHGDRFDRTLWQAYVSANKVFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRYNQVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKISPVGIHMGRLESVLNLSSTSAKLKEVQEEFKGKKVILGVDDMDIFKGISLKLLAVEHLLQQNSDLRGKVVLVQIVNPARGFGKDVQEAKNETYLIARRINDTYSKNNYQPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTARLDESLGRKSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMYAALTMSDSEKQLRHEKHYRYVSSHDVAYWANSFMQDLERACIDHYTKRCWGFGLGLGFRVVSLSHGFRKLTIDHVVSAYKRTNRRAIFLDYDGTVVPQSSISKVPSPEVISVLNALCNDPKNIVFIVSGRGRDSLSDWFTSCQMLGLAAEHGYFLRWNKDSEWEASHLSADLDWKKIVEPVMQLYTEATDGSNIEIKESGLVWHHQDADPDFGSCQAKELLNHLESVLANEPAVVTRGQHIVEVKPQGISKGWVAEEVLQTMVNSNPPDFVLCIGDDRSDEDMFETILRTVSLPSAPEIFACTVGRKPSKAKYFLDDTGDVVKLLQGLAASSNPKPRHLAHFQVSFESSV 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02856 883 Gene3D Glycogen Phosphorylase B; 339 555 - -
Phco8g02856 883 Pfam Glycosyltransferase family 20 86 571 IPR001830 GO:0003824|GO:0005992
Phco8g02856 883 Gene3D Glycogen Phosphorylase B; 80 338 - -
Phco8g02856 883 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 79 338 - -
Phco8g02856 883 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 86 574 - -
Phco8g02856 883 SUPERFAMILY HAD-like 618 862 IPR036412 -
Phco8g02856 883 NCBIfam trehalose-phosphatase 616 861 IPR003337 GO:0003824|GO:0005992
Phco8g02856 883 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 54 862 IPR001830 GO:0003824|GO:0005992
Phco8g02856 883 Pfam Trehalose-phosphatase 621 850 IPR003337 GO:0003824|GO:0005992
Phco8g02856 883 Gene3D - 747 875 IPR023214 -
Phco8g02856 883 Gene3D - 617 734 IPR023214 -
Phco8g02856 883 FunFam Trehalose-6-phosphate synthase 2 701 780 - -
Phco8g02856 883 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 747 874 - -
Phco8g02856 883 CDD GT20_TPS 86 571 IPR001830 GO:0003824|GO:0005992
Phco8g02856 883 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 617 734 - -
Phco8g02856 883 FunFam Alpha,alpha-trehalose-phosphate synthase 340 555 - -
Phco8g02856 883 NCBIfam HAD-IIB family hydrolase 619 819 IPR006379 -
Phco8g02856 883 CDD HAD_TPP 619 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02856 Phco-Chr8 42033788 42037061 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02856 8 42033788 42037061 Phco7g02151 7 38176404 38179820 ECH
Phco8g02856 8 42033788 42037061 Phco8g02856 8 42033788 42037061 ECH
Phco4g01462 4 13108197 13110946 Phco8g02856 8 42033788 42037061 PCT