Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02151 ATGAATGACTCAACCATGGTAACTGCATTTCTTTGGGCTGATTTCAAGATCTTTTCAGGTGTAGATACCCGTTCCTTAATCACACTAATATATATCTTCAAAAACTTTAAAGTAAAGATGGTGGCAAGGTCATGCTTGAATTTGTTAGACTTGGTATCAGGGGATATGCTGAATTTCTCTCGATCTCCCAGATCTCTTCCGCGAGTTATGACTGATCCAGTAATCATTTCTCATGGAGATGGTAAACAAAGTAATGATGATGATTCAGGTGTTTTCTCATCTGGACACCGTCGCAAGATAATTATAGTATCAAATTCTCTTCCTCTCAATGCGAAAAGGGATAAAGTATCTGGCAGATGGTGCTTTAGTTATGATGAGGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATGCTGATGTTGTGTATGTGGGATCTCTGAAGGTTGATGTTGATGCAAGTGAGCAAGATAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAACTGCTTGCCTACTTTTATTCCTCCAGAACTTTACAAACAATTCCATGATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGCTGCCCATGTATCCAGGAGATCGCCGCTTTGATAGGTCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTGATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTCCTTCCGACGTTTCTGCGTAAGCGTTGTAGTCGAGTCAAGCTTGGTTTTTTCCTCCACAGTCCATTTCCTTCATCAGAAATCTATAAAACTCTGCCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAGTTGGTTTTCACACCTTTGATTATGCTCGCCATTTTCTCTCCTGCTGCAGGCGAATGCTAGGCTTGGAACATGAATCCAAAAGGGGTTACATTGGGCTTGAATACTCTGGCCGGACAATATTCATTAAAATTTTGCCTGCTGGGATTCACATGGGCCGACTTCAATCTGCCTTAGATCACCCTTCCTCTTCTAACAAAGTCAGAGAAATCCACCAACAATATAAGGGCAAAAAGATTATTCTTGGTGTTGATGATATGGATATATTCAAAGGTGTCAGTTTAAAATTCTTGGCCATAGAACAACTCCTGCAGCAATATCCGGAAATGCAAGGTGAAATAGTACTGATCCAAATTTTAAACCCCCCAAGTAGTGCTGACAAAGAGGTTGACAATGCAAAGGAGGAGGCTTACATTACTGCCAAAAGGATAAATGAAAGGTTTGGTTTGGAAAGTTATGAACCTATCATCATCATTGACCGCCATGTTCCTTTCTATGAGAAGGCAGCCTATTATGCTTTGGCAGAATGCTGCATTGTGAATGCAGTTCGTGACGGTTTAAATTTGGTTCCATACAAGTACACTGTTTGTAGGCAGGGAAGTGCTCAAATGGATGAAGCTTTAGAAATTGCTTCTGACTCTCCCCGTGCAAGTGCACTTGTTGTTTCTGAGTTTATAGGCTGCACACCATCTCTTAGTGGGGCAATAAGGGTGAACCCATGGGATATTGATGCAGTAGCCGAAGCACTAAATATGGCAATCACAATGCCTGATGGAGAGAAGCAGCTTCGACATGAGAAGCACTACAGATATGTTAGTTCTCATGATGTGGCCTACTGGGCTAGAAGCTTTGAGCAAGATCTTGTGCTTTCGTGCAAGGATCACCATAGGAACTGTTGCTGGGGCATTGGCTTTGGTCTGAACTTCAGAATTTTGTCTCTGTCTCCTAGTTTCAGGAGGCTATCCATAGACCACATTGTCCCTGCATATAAACGGAGCAGTTGCAGAGCAATCTTTTTGGATTATGATGGTACAGTTGTACCTCAAGCATCCATTGTGAAAGCCCCAAGTCCTGAAGTCATATCTGTGCTAAATAATCTTTGCAGTGATGTTAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAAGTTCATTGAGTGAATGGTTTGATCAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGGTAAGCATGCTATTTGGGAAATGAGTCATGCAGATACGGATTTTGCATGGAAAAGGATTGCTGAACCTGTGATGAGATCTTATATGGAGGCCACAGACGGCTCCTCTGTAGAGAGCAAAGAGAGTGCCTTGGTATGGCATTACTGTGATGCAGATCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGCTGGATCACCTTGAAAATGTACTTGCGAATGAGCCTGTTGTTGTGAAAAAAGGACAACATATTATTGAAGTCAAGCCTCAGGGCATTACAAAAGGGTTAGTTGCACAGGAAGTTCTTTCTACCCTAACCAAGAAGGGTAAATTGCCAGATTTTGTACTGTGCATTGGTGATGATAGGTCTGATGAGGATATGTTTGAGAGCATTTTAACCAAACCTTACAGTGCTACCTCCTCCTCATCACCAGAAATCTTTGCATGCACTGTTGGACAAAAACCAAGCAAAGCTAGATACTACCTAGATGACACCATGGATGTGATGTCATTACTTGAGGGTCTTAGTGCTGCTTCAGTGCCTAAATCAAGATATTCTACAGAAACACCTTTGGAGAAAGGAGAAGGATGTTTTGAGAATATCCTATAA 2715 0.4155 MNDSTMVTAFLWADFKIFSGVDTRSLITLIYIFKNFKVKMVARSCLNLLDLVSGDMLNFSRSPRSLPRVMTDPVIISHGDGKQSNDDDSGVFSSGHRRKIIIVSNSLPLNAKRDKVSGRWCFSYDEDSIFWQLKDGLSPDADVVYVGSLKVDVDASEQDKVSLQLLEEFNCLPTFIPPELYKQFHDGFCKQHLWPLFHYMLPMYPGDRRFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCSRVKLGFFLHSPFPSSEIYKTLPVRGEILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYSGRTIFIKILPAGIHMGRLQSALDHPSSSNKVREIHQQYKGKKIILGVDDMDIFKGVSLKFLAIEQLLQQYPEMQGEIVLIQILNPPSSADKEVDNAKEEAYITAKRINERFGLESYEPIIIIDRHVPFYEKAAYYALAECCIVNAVRDGLNLVPYKYTVCRQGSAQMDEALEIASDSPRASALVVSEFIGCTPSLSGAIRVNPWDIDAVAEALNMAITMPDGEKQLRHEKHYRYVSSHDVAYWARSFEQDLVLSCKDHHRNCCWGIGFGLNFRILSLSPSFRRLSIDHIVPAYKRSSCRAIFLDYDGTVVPQASIVKAPSPEVISVLNNLCSDVNNTVFIVSGRGKSSLSEWFDQCENLGIAAEHGYFIRWGKHAIWEMSHADTDFAWKRIAEPVMRSYMEATDGSSVESKESALVWHYCDADPDFGSWQAMELLDHLENVLANEPVVVKKGQHIIEVKPQGITKGLVAQEVLSTLTKKGKLPDFVLCIGDDRSDEDMFESILTKPYSATSSSSPEIFACTVGQKPSKARYYLDDTMDVMSLLEGLSAASVPKSRYSTETPLEKGEGCFENIL 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02151 904 Gene3D - 760 890 IPR023214 -
Phco7g02151 904 Gene3D - 629 741 IPR023214 -
Phco7g02151 904 FunFam Alpha,alpha-trehalose-phosphate synthase 352 567 - -
Phco7g02151 904 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 92 350 - -
Phco7g02151 904 Gene3D Glycogen Phosphorylase B; 92 350 - -
Phco7g02151 904 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 99 582 - -
Phco7g02151 904 FunFam Trehalose-6-phosphate synthase 10 760 888 - -
Phco7g02151 904 NCBIfam trehalose-phosphatase 630 877 IPR003337 GO:0003824|GO:0005992
Phco7g02151 904 FunFam Trehalose-6-phosphate synthase 2 713 792 - -
Phco7g02151 904 CDD GT20_TPS 99 582 IPR001830 GO:0003824|GO:0005992
Phco7g02151 904 SUPERFAMILY HAD-like 630 876 IPR036412 -
Phco7g02151 904 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 629 746 - -
Phco7g02151 904 Gene3D Glycogen Phosphorylase B; 351 567 - -
Phco7g02151 904 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 67 879 IPR001830 GO:0003824|GO:0005992
Phco7g02151 904 Pfam Trehalose-phosphatase 633 867 IPR003337 GO:0003824|GO:0005992
Phco7g02151 904 NCBIfam HAD-IIB family hydrolase 631 832 IPR006379 -
Phco7g02151 904 CDD HAD_TPP 631 871 - -
Phco7g02151 904 Pfam Glycosyltransferase family 20 99 582 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02151 Phco-Chr7 38176404 38179820 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02856 8 42033788 42037061 Phco7g02151 7 38176404 38179820 ECH
Phco7g02151 7 38176404 38179820 Phco7g02151 7 38176404 38179820 ECH
Phco8g01239 8 12992123 12995027 Phco7g02151 7 38176404 38179820 PCT