Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02368 ATGGCTTCTCTTCTTCTCATCATCATCATCTCTTTTCTCACTCTCCAATGCTCACTCTCCACCGCTCACTCCCCAGTTTCCTTCACAATCCCTGTCACCAAAGACGCTGCTACCCTCCAATACCTAACCACCCTCTCCTACGGCACTCCTCTTGTTCCCACCAAACTGGTCCTTGATTTGGGAGGTTCTTTCCTCTGGCTCCACTGTGCCTCCCGAAACACCCCTTCGTCTTCTTCCCTCACCACCCCTCACCGCTCCCTCCAATGCCTCACAGCCAAAACCCACAAATCCGCCAACTCCTTTCTCTCCGGCCCCGTCGACCAACACCACTACCAACCCTGCCAAGTCTTTCCGGAGAACAGCATCACCGGAACAATCGCCTCCGAGGGAGAACTGGTGGAGGACCTCATGGCCCTTCAATCTGCGGAATCCAAAACCATCCACGAGCACCAGAGTCGCTTCACGTGTTCCCCCACCTCCCTCTTGCATGGGCTCGCCAAGGGTGCCAGAGGCATGGTTGGCCTTGCTAGGTCCCGCAGTTCGTTTCCCTCCCAGGTTTTCGACAACTTCAGCACGCAGCGGAAACTCACTCTCTGCCTCTCCTCCTCCAAAGGGGTTCTCCTCTTGGGCAACGTCGCTTACGAATCCGAGATTCTCAAGTCTCTAACCTTCACGCCCCTCGTCACCAGTTTCCCCTCCCAGGAGTACTTCATAAACGTCAGCTCCGTTAAAATCAACGGCAAAAGGTTGTCCTTGGACGTCTCAGAGTTCAACGAGCAAGAGGGTGGGGGAGGAGGGGCTTTGACTCTTATAAGCTCAATTGTGCCCTACACCACCATGCAGAGTTCCATCTACAACTCTTTCAAGGAAGCGTTTTTGGACGCTGCCGTGTCCATGAACATGACCAGAGTGGCCTCCGTGGCACCCTTTGAGCTCTGTTTCAGTTCCTTGCAAGTGGGGCCCTCTGTGCCGGTTATTGAACTGGTTCTGCAGAGTGAGATGGTGAAGTGGAGCGTACATGGGAGGAACTCCATGGTGAGAGTGAGCGATGAGGTGGCGTGTTTAGGGTTCTTGGATGGAGGTGTGAACCTGAGAAATTCAATTATCATTGGAGGGTATCAATTGGAGGATGTGATAGTGCAGTTTGACTTGGCCACTTCCATGGTGGGATTTAGTTCTTCTCTTCTCACCAAAAAAACCAAGTGTTCCGATTTTAAGTTCGGTAGTTCTATTCCTGCAGAGTCCATCTGA 1251 0.5276 MASLLLIIIISFLTLQCSLSTAHSPVSFTIPVTKDAATLQYLTTLSYGTPLVPTKLVLDLGGSFLWLHCASRNTPSSSSLTTPHRSLQCLTAKTHKSANSFLSGPVDQHHYQPCQVFPENSITGTIASEGELVEDLMALQSAESKTIHEHQSRFTCSPTSLLHGLAKGARGMVGLARSRSSFPSQVFDNFSTQRKLTLCLSSSKGVLLLGNVAYESEILKSLTFTPLVTSFPSQEYFINVSSVKINGKRLSLDVSEFNEQEGGGGGALTLISSIVPYTTMQSSIYNSFKEAFLDAAVSMNMTRVASVAPFELCFSSLQVGPSVPVIELVLQSEMVKWSVHGRNSMVRVSDEVACLGFLDGGVNLRNSIIIGGYQLEDVIVQFDLATSMVGFSSSLLTKKTKCSDFKFGSSIPAESI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02368 416 Pfam Xylanase inhibitor N-terminal 41 211 IPR032861 -
Phco8g02368 416 Gene3D Acid Proteases 211 410 IPR021109 -
Phco8g02368 416 ProSiteProfiles Peptidase family A1 domain profile. 41 392 IPR033121 -
Phco8g02368 416 Pfam Xylanase inhibitor C-terminal 235 392 IPR032799 -
Phco8g02368 416 PANTHER ASPARTYL PROTEASE-RELATED 6 409 IPR001461 GO:0004190|GO:0006508
Phco8g02368 416 Gene3D Acid Proteases 25 210 IPR021109 -
Phco8g02368 416 FunFam Basic 7S globulin 210 409 - -
Phco8g02368 416 SUPERFAMILY Acid proteases 32 400 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02368 Phco-Chr8 26241831 26243081 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02368 8 26241831 26243081 Phco11g01447 11 11082307 11083581 ECH
Phco8g02368 8 26241831 26243081 Phco8g02368 8 26241831 26243081 ECH
Phco8g02368 8 26241831 26243081 Phco11g00773 11 5593970 5595274 PCT