Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01447 ATGGCTTCTATCCGCTACTTTCTAGTCTTCTCTCTTTCTTGCTCGTTTCTTTTCTTATTATCTGAGTCCAATTATGTTACCAATCCAGCATACCTGCTTGTTCTACCTACTCAAAAAGATGTTTCCACTGGTCTCCATTGGACCAACCTTCTCAAAAGGACCCCTCTGATACAAGTACCCGTCCTAGTGGACCTCAATGGAAACCAGTTGTGGCTAAACTGTGAGCAACATTACTCATCCAAAACCTATGAAGCACCCTTCTGTCACTCTGCACAGTGCTTCAGAGCCAACACACACCAATGCCTCAGTTGCCCAGCAGCAGCAAGGCCAGGGTGCCACAAAAACACATGTGGTCTCATGTCCACCAACCCTGTCACCCAACAAAACGCTTTGGGTGAACTAGGCGAAGATGTGCTTGCAATCTACGTCTCTCTAGGAACCCAACTTGGTGAGTTGTTCACAGTCCCTCACTTCCTCTTTTCTTGTGCACCTTCCTTCCTTCTCCAAAAGGGTCTTCCAATGAATGTTGAAGGAGTAGCTGGCTTAGGTCATGGACCTATTTCTCTTCCAAACCAACTTGCTTCCCACTTTGGTCTACAACGCCAATTCACCACCTGTCTCTCTCGCCACTCATCATCTTCAAAGGGCGCTATCATCTTTGGAGATGCACCAAACAATTTCCATGAACTTCACGGCCACGCTATTTTCCAAGATCTGGCTTACACCCCATTAACCATCACCCCACAAGGAGAGTACAACGTGAGAGTCAACTCCATAAAAATCAACAAGCACAGCGTGACCCCAGTTAACAAGATATCATCAACCATAGTAGGACATTCGGGAGGAACCATGATTAGCACGTCAACTCCTCACATGGTTCTGCAGCAATCTCTTTATGAGTCTTTCATTCAAGGGTTTGCTCAACAGCTTCCAAAGGAAGCTCAAGTGAAAGCTGTGGCACCATTTCAGCTGTGTTTTCATTCCAAAAACATCAGTGAATATCCTGGCGTGGAGCTTGTGATGGACAAGCCTAATGGTCCGGTTTGGAGAATCTCTGGTGAGGATTTGACTGTGCAGACACAACCTGGAGTGTCGTGTTTGGCCGTGGTGAACGGTGGAATGCAACCTAGAGCTGAAATCACCATAGGAGCAGGGCAATTGGAAGAGAATCTGGTGGTGTTCGACCTTGCAAAATCAAGGGTTGGCTTTAGCACTTCCCCACTGGCCTCGCATGGGCTGAAATGTTCGGATCTCTTCAACTTTGTTAATGTCTGA 1275 0.4682 MASIRYFLVFSLSCSFLFLLSESNYVTNPAYLLVLPTQKDVSTGLHWTNLLKRTPLIQVPVLVDLNGNQLWLNCEQHYSSKTYEAPFCHSAQCFRANTHQCLSCPAAARPGCHKNTCGLMSTNPVTQQNALGELGEDVLAIYVSLGTQLGELFTVPHFLFSCAPSFLLQKGLPMNVEGVAGLGHGPISLPNQLASHFGLQRQFTTCLSRHSSSSKGAIIFGDAPNNFHELHGHAIFQDLAYTPLTITPQGEYNVRVNSIKINKHSVTPVNKISSTIVGHSGGTMISTSTPHMVLQQSLYESFIQGFAQQLPKEAQVKAVAPFQLCFHSKNISEYPGVELVMDKPNGPVWRISGEDLTVQTQPGVSCLAVVNGGMQPRAEITIGAGQLEENLVVFDLAKSRVGFSTSPLASHGLKCSDLFNFVNV 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01447 424 Pfam Xylanase inhibitor C-terminal 251 404 IPR032799 -
Phco11g01447 424 SUPERFAMILY Acid proteases 38 408 IPR021109 -
Phco11g01447 424 FunFam Basic 7S globulin 26 222 - -
Phco11g01447 424 PANTHER ASPARTYL PROTEASE-RELATED 11 415 IPR001461 GO:0004190|GO:0006508
Phco11g01447 424 ProSiteProfiles Peptidase family A1 domain profile. 46 404 IPR033121 -
Phco11g01447 424 Pfam Xylanase inhibitor N-terminal 50 222 IPR032861 -
Phco11g01447 424 Gene3D Acid Proteases 26 222 IPR021109 -
Phco11g01447 424 Gene3D Acid Proteases 223 424 IPR021109 -
Phco11g01447 424 CDD xylanase_inhibitor_I_like 52 407 IPR033868 -
Phco11g01447 424 FunFam Gamma conglutin 1 223 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01447 Phco-Chr11 11082307 11083581 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01720 2 47512072 47513355 Phco11g01447 11 11082307 11083581 ECH
Phco8g02368 8 26241831 26243081 Phco11g01447 11 11082307 11083581 ECH
Phco11g01447 11 11082307 11083581 Phco11g01447 11 11082307 11083581 ECH