Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00773 ATGTCTTCCTCTTTTGTCATCCATTTCGTCCTAATCTCAATACCCCTTTTCTCAGTTTGTTGCTTATCAGCATCTCATGCAGCCAAGACCAAACCACACCCATTTATCCTTCCCATTAAGAAAGACCCTGCAACCAATCTGTTCTACACTTCAGTTGGTGTAGGAACTCCTAGGCACAACTTTGATCTCACCATTGATCTTGCTGGAGAAAACCTATGGTATGACTGTAACACTCATTACAACTCTTCTTCCTACCGTCCTATCGCTTGTGGCTCAAAGCAATGCCCCGACGTTGGATGTGTTGGCTGCAATGGCCCCTTCAAACCAGGTTGCACAAACAACACATGTCCTGGTAACACAATCAATCCATTAGCAAAGTTCCTTTTCGGTAGTGGTGGCTTAGCTAAGGATTTCATATTCATTGTTCAACAGAAAGTGTCTGGCTTGCTTTCTGGCTGTCTTGACATAGATGGATTCCGACCCTTCACCAATGACGAGTCACCTCTAAATGGCTTACCCAAAAACAGCAGAGGAATTATAGGCCTTTCAAAGTCCCAGCTTGCATTACCAATTCAGCTTGCATCCACTAATAAGCTTCCTTCCAAGTTTTCTCTCTGTTTACCCTCTTTAAACCACCAAGGTTTCACCAACTTGCTTGTTGGAACTGGGGAACATCCTCTGGGAATATCCAAATTTCTCCAGACCACCCCTCTCATTGTCAACCCCATTTCCACAGGTCCTATATCTGTGGATGGTGTTGCTTCCAAGGAATACTTCATTGACGTGAAAGCAGTTAAGATTGATGGGCATGTTGTGAACCTAAAGCCTTCCCTTTTGTCTATTGACAAGAAGGGAAATGGGGGCACCAAGATTAGTACCATGAGTCCTTTCACTGAATTACAAACCTCGGTCTACAAGCCTTTCCTTCGCGATTTCCTCAAGAAAGCCTCCGAAAGAAGATTAAAGAAAGTGGCAGCAGTGGCACCATTTGAGGCATGCTTCGATTCAACAAGAATTGGTTATTCTGCAACAGGACTAGTTGTGCCAACTATTGATCTAGTTCTGGAAGGGGGAGCAAAGTGGAGTATTCATGGAGCCAATTCCATGGTTATGGCAAAGAAAAATGTTGCATGTCTGGCATTTGTTGATGGAGGGACAGAGCCTAGAATGTCTTTTGCTAAAGCTTCAATTGTGATCGGAGGATATCAGTTGCAGGACAACCATTTGGTGTTTGACCTGGCTTCCTCCAAATTAAGCTTCAGTTCATCACTTTTGCTCCATAATGCCACGTGCTCTCGCCCTTGA 1305 0.4414 MSSSFVIHFVLISIPLFSVCCLSASHAAKTKPHPFILPIKKDPATNLFYTSVGVGTPRHNFDLTIDLAGENLWYDCNTHYNSSSYRPIACGSKQCPDVGCVGCNGPFKPGCTNNTCPGNTINPLAKFLFGSGGLAKDFIFIVQQKVSGLLSGCLDIDGFRPFTNDESPLNGLPKNSRGIIGLSKSQLALPIQLASTNKLPSKFSLCLPSLNHQGFTNLLVGTGEHPLGISKFLQTTPLIVNPISTGPISVDGVASKEYFIDVKAVKIDGHVVNLKPSLLSIDKKGNGGTKISTMSPFTELQTSVYKPFLRDFLKKASERRLKKVAAVAPFEACFDSTRIGYSATGLVVPTIDLVLEGGAKWSIHGANSMVMAKKNVACLAFVDGGTEPRMSFAKASIVIGGYQLQDNHLVFDLASSKLSFSSSLLLHNATCSRP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00773 434 Gene3D Acid Proteases 22 219 IPR021109 -
Phco11g00773 434 FunFam Basic 7S globulin 223 434 - -
Phco11g00773 434 SUPERFAMILY Acid proteases 40 429 IPR021109 -
Phco11g00773 434 PANTHER ASPARTYL PROTEASE-RELATED 16 431 IPR001461 GO:0004190|GO:0006508
Phco11g00773 434 ProSiteProfiles Peptidase family A1 domain profile. 48 421 IPR033121 -
Phco11g00773 434 FunFam Basic 7S globulin 16 222 - -
Phco11g00773 434 Pfam Xylanase inhibitor N-terminal 48 221 IPR032861 -
Phco11g00773 434 Gene3D Acid Proteases 227 433 IPR021109 -
Phco11g00773 434 Pfam Xylanase inhibitor C-terminal 257 421 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00773 Phco-Chr11 5593970 5595274 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02368 8 26241831 26243081 Phco11g00773 11 5593970 5595274 PCT