Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00338 ATGTCTGAACATGAAGCTGAGAAAGGCAAACCTAATAGTATTGGTTCCTTTTCTTTTTGGCCTCTTCATTTGGAGAAAGTTTTCCCCGTTTATGCCATGGGAATTCCCAACCCGGTCTTGGATTCTTCACTTAAAAATTTCGATTGTTTTGATCCTATCTGCGATGATGTCAGAAATGAAACCAAGTTAGAGGCAGAAAGGGAGCCAATTTTAAGTAGCTTCTTCTATGCCACTATTCTATCTCATGATTGCTTGGAGCAAGCATTAGCCTTTGCTCTTGCCAACCGACTTCAAAAGCCTACTCTTTTGGCGACTCAGCTGATGGATATATTTTCTACTGTGATGAAGCATGATAAAGGTATCCAGCATTCAATTCGCTTGGATATCCAGGCATTTAAAGATCGAGATCCTTCTTCTTTGTCATATTGCTTAGCACTTTTACATATGAAGGGTTACCAATCTTTGCAAGTATATCGAGTAGCCCATGCTTTGTGGGGCCAGGGACGCAAAGTCTTAGCCTTAGCATTGCAAAGTCGAGTTAGTGAGGTTTTTGGAGTTGATATACATCCCGCTGCGAAAATTGGGAATGGAATTTTAGTAAATCATGGGACTGGTGTTGTTATTGGTGAAACTGCTATAATTGGAAACAGAGTTTCATTGATGCAAGGTGTAACTTTGGGTGGCACCGGAAAGGAAACAGGTGATCGCCACCCCAAAGTTGCTGAAGGTGTGCTAATTGGAGCTCATGCAAGTATACTTGGGAATTTTAAAGTTGGTGAATTTGTGATGACAGCTGCTAGTTCCCTTGTGTTACAAGAGATTCCTCCTCACAGCATTGTGGCTGGTGTACCAGCAAAGGTTATTGGAAGAGTACATGCGCATTATCCATCCTTCATCATGCAGCAAGGTAAGCAATAA 918 0.4161 MSEHEAEKGKPNSIGSFSFWPLHLEKVFPVYAMGIPNPVLDSSLKNFDCFDPICDDVRNETKLEAEREPILSSFFYATILSHDCLEQALAFALANRLQKPTLLATQLMDIFSTVMKHDKGIQHSIRLDIQAFKDRDPSSLSYCLALLHMKGYQSLQVYRVAHALWGQGRKVLALALQSRVSEVFGVDIHPAAKIGNGILVNHGTGVVIGETAIIGNRVSLMQGVTLGGTGKETGDRHPKVAEGVLIGAHASILGNFKVGEFVMTAASSLVLQEIPPHSIVAGVPAKVIGRVHAHYPSFIMQQGKQ 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00338 305 CDD LbH_SAT 184 284 IPR045304 -
Phco8g00338 305 Pfam Serine acetyltransferase, N-terminal 55 156 IPR010493 GO:0005737|GO:0006535|GO:0009001
Phco8g00338 305 Gene3D Hexapeptide repeat proteins 187 303 - -
Phco8g00338 305 PANTHER SERINE ACETYLTRANSFERASE 48 302 - -
Phco8g00338 305 SUPERFAMILY Trimeric LpxA-like enzymes 53 301 IPR011004 -
Phco8g00338 305 FunFam Serine acetyltransferase 187 305 - -
Phco8g00338 305 Gene3D serine acetyltransferase, domain 1 39 186 IPR042122 -
Phco8g00338 305 FunFam Serine acetyltransferase 4 39 186 - -
Phco8g00338 305 SMART SATase_N_2_a 53 157 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00338 Phco-Chr8 3137607 3140526 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00338 8 3137607 3140526 Phco8g00338 8 3137607 3140526 ECH
Phco4g00786 4 6063834 6067518 Phco8g00338 8 3137607 3140526 PCT
Phco8g00338 8 3137607 3140526 Phco4g00551 4 4057010 4058743 PCT