Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00551 ATGGCACCACCACCAACGGACTCAGAACCAGAATCCGAGGCGCTGCGGCTCAAGGCAATGGCGGAGTCCAAGTTCAAAGCCTCCAAAAACGCCAAATCCGCTCTCAAATACGCGAAGCGCGCGCAGCGTTTGTGCCCGCACCTCGCCGGCGTGTCGGAGGCCGTCACCTCGCTCACCGTCCTCGCCGCACCGGACTGGTATAGTGCCCTCGGCGCGGAGCCCTTCGCAAACAGCGGCGTCATTCGGAAACAGTACAAGAAGCTCGCGCTGCTCCTTCACCCCGACAAGAATCCCAACGTGGCGTCCGAGGAGGCCTTCAAGCACGTCGGCGAGGCATTCCACTTCCTTTCCGACCGGAGTCTCCGCCGAGAGTACGACGCCGAGCTCCGACGGAAGATCAAGGCAGAGAGCGAGACGTTCTGGACCGCATGCTCCACTTGCAGGCTCCTTCACCAGTTCCAGAGAAAGTATATGGGTCATGAATTGGTGTGTCCGAGTTGTGAGAAGAGTTTTAAGGCTGTGGAAACGGTTCAGGGTGATGGGGATGCTGATGGGGAAGGTAGGGTTAGGAGTAGGAGGTTGAAGTTGAAAGAGATAAATAAGAAAAAGGAGAAAATTGGTGTGAGAGGGAAAGTGGATAATGAAGTGGGGGATGAGAAGGAAGGGAAATTGAGGAAGAGAATGCGTTCAGTTGGGGAGGTGTTGGAGAGGTCGAAACCTGGTAAGAGGGTTAGAAATGGGGAGGAAATGATGACATTAGCTGAATTTCAGAATGAGGTAAGGAGAAAGTTGCAGGAAAAAAAGTGGAAGGAAAAAGAAAAAGAAAAGGAAAAGGAAAAGGAAAAGGAGGAGCATATAATTGAGAAGACGAGCAACAGGCGGTCGATGCGGCGGGGATTGAACTTTGAAGGTTTAGAGGTTGGAGAGGTGAGGAAGAAGAGTGTGAGGCTTGCAATTGAAGAGAAGCGTGGAGGTTTAGAGAAGAAGAAGGGATTGAGATTTGAGGAGCATAGGGATTCTGATAAAGGGGAGTTGGGAAATATGGTGGTGGTGGATTCAGATTTTTATGATTTTGACAAAGATAGAGTGGAGAAGAGCTTTAAGAAAGGTCAAGTGTGGGCAGTGTATGACGATGATGATGGAATGCCAAGGAATTATGCTTTGATTGATGGAACTCTTTCAGTGAGTCCTTTTGAAGTGAAATTAAGTTGGTTGGATGTACTGATCAGTGGGGATGGGAAGATAGTCAGTAGGGAGAAAATGGGGTTTCATATACCTTGTGGGAGATTTAAGGTTGCCAGGAAGACTTCGGTGAATTCAGTAAATATATTTTCCCATATTGTGGATTGTGACCGGGCAGCACGTGAGCTTTACAAAATTTACCCCAAGAAAGGCTCAGTATGGGCGCTTCATGGTGAGGGAAGTATTGATGCAGAGGAGGGAAAGAGGTGCTATGACATTGTTGTATGTCTGACAAGTTACAATGAGGTGAATGGTCTGAGCATGGCGTATCTGGAGAAGGTTGATGGTTACAAGACAGTATTTAGGCGGCAAGAGAAGGGGAGTGGTGCTATTAGATTTGTTGGGAAGGATGACTTGTGGTTAGTTTCTCATCAGATTCCTGCGCGGAAGCTTATTTGTGATGAAACTCCTGAACTGTTGAAAGACTGTTGGGAACTCGATCCCGCTTCACTTCCTTCAGATTTACTTACTATTGCTGGCATTGATAATTGA 1734 0.4827 MAPPPTDSEPESEALRLKAMAESKFKASKNAKSALKYAKRAQRLCPHLAGVSEAVTSLTVLAAPDWYSALGAEPFANSGVIRKQYKKLALLLHPDKNPNVASEEAFKHVGEAFHFLSDRSLRREYDAELRRKIKAESETFWTACSTCRLLHQFQRKYMGHELVCPSCEKSFKAVETVQGDGDADGEGRVRSRRLKLKEINKKKEKIGVRGKVDNEVGDEKEGKLRKRMRSVGEVLERSKPGKRVRNGEEMMTLAEFQNEVRRKLQEKKWKEKEKEKEKEKEKEEHIIEKTSNRRSMRRGLNFEGLEVGEVRKKSVRLAIEEKRGGLEKKKGLRFEEHRDSDKGELGNMVVVDSDFYDFDKDRVEKSFKKGQVWAVYDDDDGMPRNYALIDGTLSVSPFEVKLSWLDVLISGDGKIVSREKMGFHIPCGRFKVARKTSVNSVNIFSHIVDCDRAARELYKIYPKKGSVWALHGEGSIDAEEGKRCYDIVVCLTSYNEVNGLSMAYLEKVDGYKTVFRRQEKGSGAIRFVGKDDLWLVSHQIPARKLICDETPELLKDCWELDPASLPSDLLTIAGIDN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00551 577 Pfam DnaJ domain 65 126 IPR001623 -
Phco4g00551 577 CDD DnaJ 65 118 IPR001623 -
Phco4g00551 577 PRINTS DnaJ domain signature 101 121 IPR001623 -
Phco4g00551 577 PRINTS DnaJ domain signature 67 85 IPR001623 -
Phco4g00551 577 PRINTS DnaJ domain signature 85 100 IPR001623 -
Phco4g00551 577 Pfam Domain of unknown function (DUF3444) 348 546 IPR024593 -
Phco4g00551 577 SUPERFAMILY Chaperone J-domain 57 130 IPR036869 -
Phco4g00551 577 ProSiteProfiles dnaJ domain profile. 65 129 IPR001623 -
Phco4g00551 577 Coils Coil 253 293 - -
Phco4g00551 577 PANTHER BNAC03G44070D PROTEIN 11 566 - -
Phco4g00551 577 Gene3D DnaJ domain 52 147 IPR036869 -
Phco4g00551 577 SMART dnaj_3 64 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00551 Phco-Chr4 4057010 4058743 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00338 8 3137607 3140526 Phco4g00551 4 4057010 4058743 PCT