Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00786 ATGCAAGAACAGTTACGCCTGGTAGAGGGTGCGAAACGCAGCACAATCACCACAAAGCAAAACACGAAGAGAATAGCACCTATTTCAACCCCTGCCATGGCTTGTCTCAGCCGCCACCACCACCGCACCTGGCTCACTACCCAAGACATGCTCCAACGCTGCCCTCTCTCCGCCCACCACTGCCGTCTCAACGACGACGCCGACCCCATTTCCCTCCGCTCTCTCTCCTCCGCCCACCGTCTCTTCCCCGTCTACGCCATGGGCGCCCCCGAGCCCACACCCGAACCCGAGTTGGACGGACCCGACCCTATTTGGAACGCCGTCAGAGACGAGGCCAAGCTCGAGGCGGAGAAGGAGCCGATTTTGAGTAGCTTCTTGTACGCTAGTATTTTGGCGCATGATTGCTTCGAACAGGCATTGGCCTTTGTCGTCGCCAACCGTCTCCAAAACGCTACTCTCTTGGCCACTCAGCTCATGGATATTTTCTGCAATGTCATTCTGCATGACAAACCTATCCAACGATCCATTCGCCTTGACGTTCAGGCATTTAAAGATCGGGACCCTGCGTGTTTGTCCTATTGCTCCGCACTTTTGTACATGAAGGGTTATCATGCTCTGCAAGTACATCGAGTAGCCCATGCATTGTGGCACCAAGGACGCAAAGTCTTGGCCCTGGCTTTGCAAAGCCGTGTGAGTGAGGTTTTTGGAGTGGACATTCATCCAGCTGCGAAAATTGGGGAGGGAATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTGTTGGAAACAGAGTTTCATTGATGCATGGTGTAACATTAGGAGGCACAGGGAAGGAAATAGGTGATCGCCATCCCAAAGTAGGTGAAGGGGCACTAATTGGAGCTAGTGCAACCATACTTGGGAATATAAAGATTGGTGAAGGTGCGATGATAGCTGCAGGTTCCCTTGTGTTAAAAGATGTTCCTCCCCACAGCATTGCGGCAGGAATACCAGCTAAAGTTATTAGTGGTCTACAGGACCATGATCCATCTTTAACCATGAAGCATGATGCTACTAAAGATTTTTTTCTCGCAAGTAGTTAA 1095 0.5078 MQEQLRLVEGAKRSTITTKQNTKRIAPISTPAMACLSRHHHRTWLTTQDMLQRCPLSAHHCRLNDDADPISLRSLSSAHRLFPVYAMGAPEPTPEPELDGPDPIWNAVRDEAKLEAEKEPILSSFLYASILAHDCFEQALAFVVANRLQNATLLATQLMDIFCNVILHDKPIQRSIRLDVQAFKDRDPACLSYCSALLYMKGYHALQVHRVAHALWHQGRKVLALALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGTGKEIGDRHPKVGEGALIGASATILGNIKIGEGAMIAAGSLVLKDVPPHSIAAGIPAKVISGLQDHDPSLTMKHDATKDFFLASS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00786 364 Pfam Bacterial transferase hexapeptide (six repeats) 288 321 IPR001451 -
Phco4g00786 364 Gene3D serine acetyltransferase, domain 1 90 237 IPR042122 -
Phco4g00786 364 FunFam Serine acetyltransferase 238 359 - -
Phco4g00786 364 SMART SATase_N_2_a 104 208 IPR010493 GO:0005737|GO:0006535|GO:0009001
Phco4g00786 364 CDD LbH_SAT 235 335 IPR045304 -
Phco4g00786 364 Gene3D Hexapeptide repeat proteins 238 361 - -
Phco4g00786 364 PANTHER SERINE ACETYLTRANSFERASE 89 360 - -
Phco4g00786 364 Pfam Serine acetyltransferase, N-terminal 104 207 IPR010493 GO:0005737|GO:0006535|GO:0009001
Phco4g00786 364 SUPERFAMILY Trimeric LpxA-like enzymes 103 352 IPR011004 -
Phco4g00786 364 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 297 325 IPR018357 GO:0016740
Phco4g00786 364 FunFam Serine acetyltransferase 4 91 237 - -
Phco4g00786 364 NCBIfam serine O-acetyltransferase 176 337 IPR005881 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00786 Phco-Chr4 6063834 6067518 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00786 4 6063834 6067518 Phco4g00786 4 6063834 6067518 ECH
Phco4g00786 4 6063834 6067518 Phco8g00338 8 3137607 3140526 PCT