Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02355 ATGGTGCAAACTAGGAAGTTCAGAGGTGTCAGGCAGCGCCATTGGGGTTCTTGGGTATCTGAAATTCGCCACCCACTTCTCAAAAGGAGGGTGTGGCTAGGGACGTTTGAAACAGCAGAAGAAGCAGCACGAGCATACGATCAAGCTGCGATACTGATGAGTGGGCGAAACGCGAAAACCAACTTCCCAATAGTTCAAACTCCGGAGGGTGATCCAAAGACGCTAACACCTACGCAGCACAATATTCCATCAACCTCAAAGGAACTGGAAGAGATTCTTCATGCAAAGCTTCGAAAGTGTGGGAAGCTTCCGTCTCCTTCCATGACTTGCTTGAGGCTGGACCCTGAGAACGCCCACATTGGCGTCTGGCAGAAGCGCGCAGGTCAGCATTCCGACTCCAACTGGGTAATGATGGTGCCCTTCGGAAAGAAGGGTGATGAAGGTGCAAGTCATTCCATCGCTAATACTTCATCTGCTTCGTTTTCTGAGTGTGATCAGAGCCAACAAGGTAGAAGGCAAGAGCATGTGAGAACAGAGATGGAGGAGGAAGAGAGAATCGCTATGCAAATGATCGAAGAACTCCTCAGCAGAAACTGGCCCACTAGCCCTTCATGTAATAACATGTACTAA 630 0.4937 MVQTRKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPIVQTPEGDPKTLTPTQHNIPSTSKELEEILHAKLRKCGKLPSPSMTCLRLDPENAHIGVWQKRAGQHSDSNWVMMVPFGKKGDEGASHSIANTSSASFSECDQSQQGRRQEHVRTEMEEEERIAMQMIEELLSRNWPTSPSCNNMY 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02355 209 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Phco7g02355 209 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Phco7g02355 209 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Phco7g02355 209 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Phco7g02355 209 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 165 - -
Phco7g02355 209 MobiDBLite consensus disorder prediction 146 177 - -
Phco7g02355 209 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Phco7g02355 209 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Phco7g02355 209 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Phco7g02355 209 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Phco7g02355 209 MobiDBLite consensus disorder prediction 150 167 - -
Phco7g02355 209 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02355 Phco-Chr7 41262853 41263765 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phco7g02355 AP2 1e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02355 7 41262853 41263765 Phco7g00762 7 5909483 5910242 ECH
Phco7g02355 7 41262853 41263765 Phco7g02355 7 41262853 41263765 ECH
Phco8g01581 8 16194930 16195735 Phco7g02355 7 41262853 41263765 PCT