Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01239 ATGGTGGTAAGGTCGTCCTCCAATTTGTCTGACTTGGTATCTGAGGACAGTTTGAATTCTCCAAAAACTCCACGAGATCTTTCTCAAACCCTGTATACTTTAGGAATTATGACTGATGTTGATGGCAAAGTAAGGGACAATGATGATTCAAATGCTTTCTCATCAGAACAACATCAGAAGATCATTATAGTAGCAAATTTTCTCCCTCTCAATGCTCAAAAGGATAAAATGTCTGACAAATGGTGCTTCAAATATGATGAAGATGCAATCTTGTTGCCATTAAAGGATGGTCTCTCTTCTAACACTGAGGTTTTTTATGTGGGTTCTCTGAATGTTGATGTTGATGCCAGTGAACAAGAGAATGTTTCTCTTCAGCTACAGGAGAAATTCAATTGCTTGCCTACCTTTATTCCTTCAGACCTACAGAAACAATTTTATGATGGATTCTGTAAGCGACATTTGTGGCCGCTATTCCATTACATGTTGCCCTTTAATCCACACTGCGGCAACCGCTTTGACAAGTCACTGTGGACAGCTTACGTTTCTGTTAACAAAATATTTGCTGATAAAGTCACGGAGGTTATTAACCCAGAGCTTGATTATGTATGGGTTCATGATTATCATCTCTTGGTTATTGCAACATTTCTACGGAAGCGATATAATTGGATCAAGCTAGGATTTTTTCTCCACTCTCCATTTCCTTCATCAGAAATTTACCGGGCTTTACCTGTCAGGGATGAAATTTTGAAAGCATTGCTTAATGCAGATTTAATTGGTTTTCATACATTTGATTATGCTCACCACTTTCTTTCTTGCTGCAGTCGAATTCTTGGCTTAAAATATGAATCCAAAATGGGTTACATCAAGCTTGAATACTGTGGTCGCATAATAGTAATTAAAATCTTGTCTATAGGGATTGATATGTGTCGACTTCAATCTGCCTTGAATCACCCTTCTTTTACATTCCATGTCAGAGAAATTTGCGAGAAGTTCAAGGGGAAAAAACTTATTCTTGGAGTTGATGATATGGACATTTTTAAAGGTATCAGCCTAAAGTTAATGGCCATTGAGCAACTCCTTCAGCAATATCCTGAATTTCTGGGTGAATTAATACTTGTTCAGATTGTAAATCCAGCAAGGAGTGCTGGGAAGGATGTAGATGAGGCAAGGAATGAGGTGCACGATATTGCCAACAGGATAAATGAAAGTTTTGGTTTCCCAGATTATAAACCTGTCATCATCATAGATCGTCATGTTCCTATGTATGAGAAGGCATCCTACTATGCTTTAGCAGAATGTTGTATTGTGAATGCAGTGCGGGATGGTATGAATTTGGTTCCTTACGAGTACATTGTCTGCAGGGAGGGAAGTCCTAATAGGGATAAAGCTTTACACATTGGTTCTGATCCCCCTCGAACAAGTGCACTTGTCGTTTCTGAGTTTATTGGCTGTTCACCGTCTCTAAGTGGGGCAATCAGGGTAAACCCGTGGGATATTGATGCTTTTGCCAATGCACTGAATATGGCAATCAGAATGCCCAGTGGAGAGAAACAGTTGCGGCATGAGAAACATTATCGATACATTAGCTATCATGATGTAGCTTACTGGGCCAAAAGTTTTCTGCACGATCTTGAGCATTCGTGCAAGGATCACCACAGCAAAAATTACTGGGCGATAGGCTTTGGCCTTAATTTCAGAGTTTTGTCCCTTTCTCCTACTTTCAGGAAGCTTAACAAAAGCCATGCTGTTTCTTCATATGAAAGGACAAATTGCAGGGCATTAATTTTGGATTGTGACGGCACAGTTGTCCCTTCCATTGATAATACCCCAAGTCCTGAAATTATAGATGTTCTAAATAACCTTTGCAGTGATCCTAAAAACATTGTTTTCATAGTAAGTGGCAGGGGGAAAACCACACTCAGCGAATGGTTTGATCAGTGTCAGAATCTCTGTTTAGCAGCTGAGCATGGTTATTTTATAAAATGGAGTCAACAGTCAACTTGGGAAATGAATCATACAAGTATAGTTTCTTCTTGGAAAGAGATTGTTGAACCTGTGATGAGATTGTATACTGAGGCAACCGATGGCTCCTACATAGAGACCAAAGAGAGTGCCTTGGTATGGCACTACTGTGATGCTGATCCCAAATTTGGAACTTGGCAAGCCAAGCAGCTGTTGGATCACCTCGAGTGTTTATTTGCAAACGAACCAGTAACAGTAAAGAAAGGAAAACACATTATTGAAGTCAAGTCACAGGGGATCACTAAAGGGTTAGTTGTAGAGAACATCCTGTCCAAGATGACCAAGGATGGACAATCCCCAGATTTTGTACTGTGTATAGGGGATGATGGATCTGATGAGGATATGTTTGAGAGCCTGCTGAGTAAAGTTTACAGTGAAACCTCTTATACTGCACCACAGATCTTTGCATGCACTGTTGGTCAAAAACCAAGTAAAGCTAGGTACTATTTAGATGATAATGAGGATGTGATGGGGCTGCTTCGAGCTCTTAGCACCGTTTCAGTGTCTAAACCAGCATGTCTTGAAGAAAACTCTGGTGGAAAAACAGAATCAGCCTTCTTCAAGAACGACTGA 2595 0.4008 MVVRSSSNLSDLVSEDSLNSPKTPRDLSQTLYTLGIMTDVDGKVRDNDDSNAFSSEQHQKIIIVANFLPLNAQKDKMSDKWCFKYDEDAILLPLKDGLSSNTEVFYVGSLNVDVDASEQENVSLQLQEKFNCLPTFIPSDLQKQFYDGFCKRHLWPLFHYMLPFNPHCGNRFDKSLWTAYVSVNKIFADKVTEVINPELDYVWVHDYHLLVIATFLRKRYNWIKLGFFLHSPFPSSEIYRALPVRDEILKALLNADLIGFHTFDYAHHFLSCCSRILGLKYESKMGYIKLEYCGRIIVIKILSIGIDMCRLQSALNHPSFTFHVREICEKFKGKKLILGVDDMDIFKGISLKLMAIEQLLQQYPEFLGELILVQIVNPARSAGKDVDEARNEVHDIANRINESFGFPDYKPVIIIDRHVPMYEKASYYALAECCIVNAVRDGMNLVPYEYIVCREGSPNRDKALHIGSDPPRTSALVVSEFIGCSPSLSGAIRVNPWDIDAFANALNMAIRMPSGEKQLRHEKHYRYISYHDVAYWAKSFLHDLEHSCKDHHSKNYWAIGFGLNFRVLSLSPTFRKLNKSHAVSSYERTNCRALILDCDGTVVPSIDNTPSPEIIDVLNNLCSDPKNIVFIVSGRGKTTLSEWFDQCQNLCLAAEHGYFIKWSQQSTWEMNHTSIVSSWKEIVEPVMRLYTEATDGSYIETKESALVWHYCDADPKFGTWQAKQLLDHLECLFANEPVTVKKGKHIIEVKSQGITKGLVVENILSKMTKDGQSPDFVLCIGDDGSDEDMFESLLSKVYSETSYTAPQIFACTVGQKPSKARYYLDDNEDVMGLLRALSTVSVSKPACLEENSGGKTESAFFKND 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01239 864 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Phco8g01239 864 SUPERFAMILY HAD-like 592 837 IPR036412 -
Phco8g01239 864 FunFam Trehalose-6-phosphate synthase 10 720 847 - -
Phco8g01239 864 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Phco8g01239 864 Gene3D Glycogen Phosphorylase B; 313 529 - -
Phco8g01239 864 Gene3D - 672 752 - -
Phco8g01239 864 Gene3D Glycogen Phosphorylase B; 51 312 - -
Phco8g01239 864 FunFam Trehalose-6-phosphate synthase 2 673 752 - -
Phco8g01239 864 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 53 838 IPR001830 GO:0003824|GO:0005992
Phco8g01239 864 MobiDBLite consensus disorder prediction 1 26 - -
Phco8g01239 864 CDD HAD_TPP 593 831 - -
Phco8g01239 864 NCBIfam HAD-IIB family hydrolase 594 792 IPR006379 -
Phco8g01239 864 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 549 - -
Phco8g01239 864 Gene3D - 594 824 IPR023214 -
Phco8g01239 864 NCBIfam trehalose-phosphatase 592 837 IPR003337 GO:0003824|GO:0005992
Phco8g01239 864 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 706 - -
Phco8g01239 864 FunFam Trehalose-6-phosphate synthase 8 55 313 - -
Phco8g01239 864 Pfam Trehalose-phosphatase 595 827 IPR003337 GO:0003824|GO:0005992
Phco8g01239 864 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01239 Phco-Chr8 12992123 12995027 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01239 8 12992123 12995027 Phco7g02151 7 38176404 38179820 PCT