Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00760 ATGCCTGAGCTGCTACACGGGATTCTTAAGGTAACCATATTTGAAGTTGATAGACTGCATACTGGATGTCATTTGGATTTCTGTCAGAAGGGCACAACACACAAGGGTAAGAGATTTCTAGCCCAGGTCAAGGGTTGTCTGCTGTGCCGGCGTGAGATTGTTGGGACAAGATTGTATGCAACAGTTGATTTAGACAAGGCAAGGGTTGGACGAACGAGGATGATAGGAAACCAACCCTCTCACCCAAAGTGGAACGAGAGCTTTGAAATCTACTGTGCCCATCGTATCTCAAACATCATATTCTCTGTCAAAGATGGTAACCCAATTGGAGCAACTCTAATTGGAAGAGCCTATGTCCCTGTGGAGCAAGTTCGCAAGGGCCCCATAATTAAGAGGTGGGTTGAGATATTAGACGATGAAGACCATCGTCCCGTGCCGGGTCACTCCAAAATCTGTGTCACCATGCAATTCAGCAGTGTCACACAGGACACAGCATGCTCATGGTCTCAGGGAATTCGCATGCCATTTTATGGAGTTCCTCGTACATTTTTCAATCAGAGAGAAGGTTGTCATGTTACTTTGTACCAAGATGCTCATGCCCCACGTGGCCTTCGTGTTGTCCCATATATTCCAATATCCGAAGGAAAAGACTACTTGCCCGCAAGATGTTGGGAGGACATTTACACTGCCATTATGGACGCTGAGTATTTTGTTTACATAGCTGGTTGGTCTGTTTACACTGAAATAGCATTGGTTAGGGACAGAGAGGAATCAAATATCACCCTCGGGGAGTTACTTAAGAAGAAGGCTGATGAAGGTGTCAAGGTTCTTTTGCTTATTTGGAATGACAGAACTTCTGTACCAGAATTCAAGAAAGATGGCTTGATGGCAACTCATGATCAGGAAACTGCTGCTTACTTTAGAAACACGAAGGTGCATTGTGTTTTGTGTCCACGAAACCCGGATGATGGGAGAAGCATGATTCAAGGCCTTCAAGTATCAACTATGTTCACTCATCACCAAAAGAGTGTGGTTGTTGATGCCGGTTCTGTAGGGTCATCACTGAAGCGAAGTGTCGTAAGTTTCATAGGTGGCCTTGATCTTTGTGACGGAAGGTATGATACTAGGGATCATCCTCTATTTTCAACTTTGAATACAGTGCATATAAATGATTTCCATCAACCAAACTTCCCGAGTGCTTCTATTGATAAAGGTGGTCCTAGAGAGCCATGGCATGATATTCATTGCAAGCTAGAAGGTCCCATTGCTTGGGATGTTTTGTACAATTTTGAGCAAAGGTGGGAGAAGCAAGTAGGGAAGGAACTGCTATTCTCGCTTGATGATCTTGATCACATTCTAGTCCACCCATCTGATGCACAAAAATCAGAAGTGGGAGAAGAAGACACGTGGAATGTTCAGTTGTTTAGATCCATTGATGGTGGTGCTGCTTTTGGCTTTCCCCAAGCCCCGGATGAAGTTGCTGAATTAGGCCTTGTTAGTGGGAAAGACAATATCATTGAGAGAAGTATTCAGGATGCCTACATTAATGCTATTAGGCGTGCAAAAAACTTCGTCTACATTGAGAACCAATACTTCCTAGGGAGTTCATATGCTTGGCACGCAACTAATGATTTTGTGGTTGAGAACATTGGTGCTTTGCATCTTATACCAAAGGAGTTGACATTGAAGATTGTAAGCAAGATTGAAGCAAAAGAAAGGTTTTCTGTGTACGTAGTGATCCCAATGTGGCCTGAAGGTGTACCTGAAAGTGATTCGGTTCAAGCAATATTAGATTGGCAGAGAAGAACCATTGAGATGATGTATTCCGACATTGCTGATGCCTTAGCAAAATTGGGCATTCAAGCACACCCTCGAGATTATTTGACATTTTTTTGCCTTGGCAAGAGGGAGCATAAGGAACCCGGAGAGTATACTCCTCCACAGGAACCAGAGCCTGAGAGTGACTACAGAAGAGCCCAAAATTCTAGGAGGTTCATGATCTATGTTCATTCCAAAATGATGATAGTTGATGATGAATACATAATCGTTGGCTCTGCAAACATAAATCAAAGATCAATGGAGGGTTCAAGAGACAGTGAGATTGCAATGGGTGCATTCCAACCACGTCATCTAGCATGGAATGGGCGAGCCAGAGGGGAGATATATAGATTTCGACGTGCACTATGGTATGAGCACCTTGGGGACCATGGTTTTGAGTCAAAAATCTTGGACAATCCAGAACATTTGGAGTGCATAGGTCTTGTGAATAGACTCGCAGAGGAGAATTGGGAGATGTACTCAAAGGAAACATTTGATGAAGTTAGAGCATTTCACCACCTCATGCGCTACCCTATACATGTAGGCCAGGATGGAACCATAACAAATCTTCCTGGGTTTCAATATTTTCCTGACACCCAGGCTCGGATTTTGGGTTCCTGTTCAAATTTCCTTCCTTCAATTCTCACCACCTAG 2472 0.4365 MPELLHGILKVTIFEVDRLHTGCHLDFCQKGTTHKGKRFLAQVKGCLLCRREIVGTRLYATVDLDKARVGRTRMIGNQPSHPKWNESFEIYCAHRISNIIFSVKDGNPIGATLIGRAYVPVEQVRKGPIIKRWVEILDDEDHRPVPGHSKICVTMQFSSVTQDTACSWSQGIRMPFYGVPRTFFNQREGCHVTLYQDAHAPRGLRVVPYIPISEGKDYLPARCWEDIYTAIMDAEYFVYIAGWSVYTEIALVRDREESNITLGELLKKKADEGVKVLLLIWNDRTSVPEFKKDGLMATHDQETAAYFRNTKVHCVLCPRNPDDGRSMIQGLQVSTMFTHHQKSVVVDAGSVGSSLKRSVVSFIGGLDLCDGRYDTRDHPLFSTLNTVHINDFHQPNFPSASIDKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKELLFSLDDLDHILVHPSDAQKSEVGEEDTWNVQLFRSIDGGAAFGFPQAPDEVAELGLVSGKDNIIERSIQDAYINAIRRAKNFVYIENQYFLGSSYAWHATNDFVVENIGALHLIPKELTLKIVSKIEAKERFSVYVVIPMWPEGVPESDSVQAILDWQRRTIEMMYSDIADALAKLGIQAHPRDYLTFFCLGKREHKEPGEYTPPQEPEPESDYRRAQNSRRFMIYVHSKMMIVDDEYIIVGSANINQRSMEGSRDSEIAMGAFQPRHLAWNGRARGEIYRFRRALWYEHLGDHGFESKILDNPEHLECIGLVNRLAEENWEMYSKETFDEVRAFHHLMRYPIHVGQDGTITNLPGFQYFPDTQARILGSCSNFLPSILTT 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00760 823 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 335 372 IPR001736 GO:0003824
Phco7g00760 823 FunFam Phospholipase D delta 214 451 - -
Phco7g00760 823 SMART pld_4 665 692 IPR001736 GO:0003824
Phco7g00760 823 SMART pld_4 335 372 IPR001736 GO:0003824
Phco7g00760 823 CDD C2_plant_PLD 4 157 - -
Phco7g00760 823 Pfam Phospholipase D Active site motif 666 692 IPR001736 GO:0003824
Phco7g00760 823 Pfam Phospholipase D Active site motif 335 372 IPR001736 GO:0003824
Phco7g00760 823 SMART C2_3c 8 133 IPR000008 -
Phco7g00760 823 SUPERFAMILY Phospholipase D/nuclease 510 734 - -
Phco7g00760 823 Gene3D Endonuclease Chain A 483 708 - -
Phco7g00760 823 Gene3D Endonuclease Chain A 214 457 - -
Phco7g00760 823 PANTHER PHOSPHOLIPASE D 4 811 IPR015679 -
Phco7g00760 823 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 158 IPR035892 -
Phco7g00760 823 FunFam Phospholipase D 477 711 - -
Phco7g00760 823 SUPERFAMILY Phospholipase D/nuclease 178 446 - -
Phco7g00760 823 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 665 692 IPR001736 GO:0003824
Phco7g00760 823 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Phco7g00760 823 PIRSF PLD_plant 1 823 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Phco7g00760 823 Pfam C2 domain 9 135 IPR000008 -
Phco7g00760 823 Gene3D C2 domain 6 167 IPR035892 -
Phco7g00760 823 Pfam Phospholipase D C terminal 742 812 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00760 Phco-Chr7 5889430 5892974 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00760 7 5889430 5892974 Phco1g00133 1 954486 960241 ECH
Phco7g00760 7 5889430 5892974 Phco7g00761 7 5895681 5898574 ECH
Phco7g00760 7 5889430 5892974 Phco7g00760 7 5889430 5892974 ECH