Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00761 ATGTCGCGTTTGCTGCATGGGAGCCTCGATGTGACCATATACGAGGTGGATACACTGCCAACTCTAAACGACTGCGATTTCAATCTCTGCTGCAAGGGTACAAGTCGAAGCGTGAGGAAGAGAGTCCTCTCCCAACTCAAGAGTTGTTTGTTCTGTCAATGCCAATGCCAGCCCGGGTCTACCCAAAGGGGTCTCTATGCAACAGTTGATTTAGACAAGGCAAGAGTTGGAAGGACTAAACTGCTAAATGAACGCTCCAACACCACGTGGAATGATACCTTTCACATATACTGTGCGCATTTGATCTCCCATGTTATATTCACTGTCAAACAAAAAGACCCAATTGATGCAACTCTGATTGGAAGAGCTTATGTCCCAGTTGAGCAAGTTGTGAAAGGATCCATAGTGGACACATGGGTCCAAATATTAGACGAGGATCTTAATCCCATACCAAGTGACTCTAAAATCCATGTCAAAATGCAATTTTCTAATGTTAGGAATGACGTAAACTGGTCTGGAGGAATAAGAAGCCCAAGGTTTCAAGGAGTTCCCCACACCTTCTTCAGTCAAAGAACTGGTTGCAACGTTACTTTGTACCAAGATGCCCATGTTTCAGATGGTTTTGAGCCGAGGATTCCCGTGTCAGGAAGAAAGCATTATGAGTCTAGGAAATGCTGGGAGGATATTTACAATGCCATTTCGGATGCTAGGTACTTTATTTACATAACTGGTTGGTCAGTGTACACTGAAATAACCTTGATTAGGGACCCCGTGCAGCCCAAGAGAATCACCCTTGGGGAGCTTCTCAAGAGGAAAGCAGAGGAAGGTGTTAGTGTTCTTATGCTTGTTTGGGATGATAAAACATCTGTGCCAGATTTCAAGAAAGATGGCTTGATGGCAACCCATGATCAAGAAACTGCAGATTACTTCAAAAACACAAAGGTAAATTGCGTTTTGTGTCCACGGAACCCGGATGTTGGAAGAAGCATTGTGCAAGGTTTGGAAACTTCAACAATGTTCACTCATCATCAAAAGACTATAGTTGTCGATAGTCAAGTTGTTGGTCCTGCTCTGGGACAACGACAAAGGAGAACAATAACAAGTTTTGTAGGTGGACTTGATCTTTGTGATGGGAGATATGATACTCAGGAACATCCTCTATTTTCAACTTTGGATACAGTGCATAAAGATGACTTCCATCAGCCAAATTTCCCAGGTGCTTCCATCAAAAAAGGTGGTCCAAGAGAGCCATGGCACGATATTCACTGCAAGTTAGAAGGGGATGTTGCTTGGGATGTTTTGTCCAATTTTCAACAAAGGTGGGAGAAGCAGGTTGGGAATCAGCTCCTATTCCCTTCAAGCATGCTTAACGAGTACTTTGTCCCTCGATCCACTGTGGCAACAACAAATGATAATGAGACTTGGAATGTTCAGTTGTTCAGATCCATTGATGGTGGTGCAGCTTTTGGCTTCCCCCAAGACCCACAAGAAGCAGCTGAATTAGGCCTTGTTAGTGGGAACAACAACATCATTGATAGGAGTATTCAAGATGCTTATATAAACGCTATTCGAAGAGCCCAAAACTTCATCTACATTGAAAACCAATATTTCCTAGGGAGTTCATATGGTTGGAAAGCATCTGGTATTGTAGTTGAGGATATTGGTGCATTGCATCTTATACCAAAGGAGGTGTCATTGAAGATTGTTAGCAAGATTGAAGCAGGGGAAAGATTTTCTGTGTATGTTGTCATACCAATGTGGCCAGAAGGCATACCTGAGAGTGATTCAGTTCAAGCAATACTAGACTGGCAAAGGAGGACAATGGAGATGATGTATGCTGATATAGCTCAAGCCATTCAAAGAACTGGAATTGAAGCCCACCCAAGGGACTACTTGACCTTTTTCTGCCTCGGAAACCGTGAGGGTCAGAAAGTTAGCAAGTACACTCCTACTGAGGCACCACAACCCGACAGTGACTACAGTAGAGCACAAAAGTCTAGGCGATTCATGATCTATGTTCATGCCAAGATGATAATAGTTGATGATGAATACATAATAATTGGTTCTGCAAACATAAACCAAAGATCGATGGATGGGGCAAGAGACAGCGAGATTGCAATGGGTGCATTCCAGCCACGGCATTTAGCATGTAATGGGCCACTCAGAGGACAGATATATGGATTTCGACGTGCACTATGGTATGAACACCTCGGGGATATTAATGATACAAGCATTTTCAACAATCCTGAAAGCGAAGAATGCATCAGGCTAGTGAATCATCTTGCTGAAACCAACTGGGCTGCATACTCTGACCAAACATTTGATGAGAATAGAGAATTTCATCACCTCATGCGTTATCCAATAGAAGTAACCCACTATGGAACCATAACCAACCTTCCAGGGCTTCAATATTTTCCTGACACTAAGGCTCGGATTTTGGGTTCCAAATCAGATTATCTTCCTCCAATTCTCACCACCTAG 2481 0.4309 MSRLLHGSLDVTIYEVDTLPTLNDCDFNLCCKGTSRSVRKRVLSQLKSCLFCQCQCQPGSTQRGLYATVDLDKARVGRTKLLNERSNTTWNDTFHIYCAHLISHVIFTVKQKDPIDATLIGRAYVPVEQVVKGSIVDTWVQILDEDLNPIPSDSKIHVKMQFSNVRNDVNWSGGIRSPRFQGVPHTFFSQRTGCNVTLYQDAHVSDGFEPRIPVSGRKHYESRKCWEDIYNAISDARYFIYITGWSVYTEITLIRDPVQPKRITLGELLKRKAEEGVSVLMLVWDDKTSVPDFKKDGLMATHDQETADYFKNTKVNCVLCPRNPDVGRSIVQGLETSTMFTHHQKTIVVDSQVVGPALGQRQRRTITSFVGGLDLCDGRYDTQEHPLFSTLDTVHKDDFHQPNFPGASIKKGGPREPWHDIHCKLEGDVAWDVLSNFQQRWEKQVGNQLLFPSSMLNEYFVPRSTVATTNDNETWNVQLFRSIDGGAAFGFPQDPQEAAELGLVSGNNNIIDRSIQDAYINAIRRAQNFIYIENQYFLGSSYGWKASGIVVEDIGALHLIPKEVSLKIVSKIEAGERFSVYVVIPMWPEGIPESDSVQAILDWQRRTMEMMYADIAQAIQRTGIEAHPRDYLTFFCLGNREGQKVSKYTPTEAPQPDSDYSRAQKSRRFMIYVHAKMIIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPRHLACNGPLRGQIYGFRRALWYEHLGDINDTSIFNNPESEECIRLVNHLAETNWAAYSDQTFDENREFHHLMRYPIEVTHYGTITNLPGLQYFPDTKARILGSKSDYLPPILTT 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00761 826 PANTHER PHOSPHOLIPASE D 4 815 IPR015679 -
Phco7g00761 826 Pfam C2 domain 9 141 IPR000008 -
Phco7g00761 826 ProSiteProfiles C2 domain profile. 1 140 IPR000008 -
Phco7g00761 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 669 696 IPR001736 GO:0003824
Phco7g00761 826 Pfam Phospholipase D C terminal 745 816 IPR024632 -
Phco7g00761 826 Pfam Phospholipase D Active site motif 670 696 IPR001736 GO:0003824
Phco7g00761 826 Pfam Phospholipase D Active site motif 338 379 IPR001736 GO:0003824
Phco7g00761 826 CDD C2_plant_PLD 1 162 - -
Phco7g00761 826 Gene3D Endonuclease Chain A 212 473 - -
Phco7g00761 826 SMART C2_3c 8 139 IPR000008 -
Phco7g00761 826 FunFam Phospholipase D 482 715 - -
Phco7g00761 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 338 379 IPR001736 GO:0003824
Phco7g00761 826 SUPERFAMILY Phospholipase D/nuclease 168 452 - -
Phco7g00761 826 PIRSF PLD_plant 1 826 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Phco7g00761 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 165 IPR035892 -
Phco7g00761 826 Gene3D Endonuclease Chain A 484 711 - -
Phco7g00761 826 SUPERFAMILY Phospholipase D/nuclease 510 739 - -
Phco7g00761 826 Gene3D C2 domain 6 171 IPR035892 -
Phco7g00761 826 FunFam Phospholipase D delta 216 459 - -
Phco7g00761 826 SMART pld_4 338 379 IPR001736 GO:0003824
Phco7g00761 826 SMART pld_4 669 696 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00761 Phco-Chr7 5895681 5898574 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00761 7 5895681 5898574 Phco7g00761 7 5895681 5898574 ECH
Phco7g00760 7 5889430 5892974 Phco7g00761 7 5895681 5898574 ECH