Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01094 ATGGCCACTAGTTATCCAGACGGTTATTTGGTGAACCATGACAGATGTAATTTTGCCAACTTCATGGACTTTGAAGGGTCTAAGTTAAGTCACAACCTAAACCCATCATATATGCAACATGCTGTTGTGGTTCATGGTTTGTCACTGCCTACCAATGCACATTGGGATTTTGGATTAGTATGGGAAAAAGGATTGGATAGTTCACTGATGGAGTTGGGCTACTTAGGCAGCATTTCAGAGATAATGATGCCAAATTATGAAACAAAAGTGATCAATCATGGAATGCACGCAGACATATCTCACTTGGGGACTCCCGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGACCCAGAGGTCTCTTGGATTGATGGGCAGGTATTAAAAATCAATGGAAAGGATGCTGAAATTGAAACTACCAATGGAAAAAAGGTTAATGCAAATTTATCAAAAATATATCCTAAGGATATGGAAGCTCCTCCTGGTGGAGTGGACGATATGACTAAACTGTCCTATTTGCATGAGCCAGGAGTCCTGCAGAACTTAAAGGCTAGATATGAATTGAATGAAATATACACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGGTGCACATATGATGCAACAATACAAGGGAGCACCATTTGGAGAATTAAGTCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCGATGATTATTGAAGGAAAAAGTAATTCAATTCTAGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCAGTACCTTGCTTTCTTAGGTGGTAGGGCTGGTACTGAAGGACGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGGAATGCTAAAACTGTTAGGAATAACAATTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAAAGTGGAAGAATATCAGGAGCAGCCATCCGAACATATCTTCTAGAGAGATCTCGTGTTTGCCAAATTAATGATCCTGAAAGGAATTACCATTGCTTTTATCTTCTTTGTGCTGCACCAAACGAGGAAATTGAGAAATACAAATTAGGAAATCCTAGATCATTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGACATAAGTGATGCTCGTGAATATCTTGCCACACGGAGAGCTATGGATATTGTTGGAATAAGTCAAAGAGATCAGGAAGCCATTTTCAGAGTTGTTGCTTCAATTCTTCATATTGGTAATATTGAATTTACCAAAGGAAAAGATGTTGACTCATCGGTTCCAAAAGATGACAAAGCCAAATTCCACCTGCGAACAACTGCTGAGCTTCTCATGTGTGACGCCGATGCCTTGGAAGATGCATTATGTAAGCGTGTCATGATCACCCCAGAAGAAGTTATAAAAAGGAGCCTTGACCCCCAAAGTGCAGCAGTGAGTAGAGATGGATTGGCAAAAACAATTTATTCTCGGCTATTTGACTGGCTGGTGGACAAGATTAATAATTCAATCGGACAAGACCCCAAATCTAAGTCTTTGATTGGGGTCCTAGATATCTATGGTTTTGAAAGTTTTAAAGCTAACAGTTTCGAGCAATTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTTAATCAGCACGTGTTTAAAATGGAACAAGAAGAATATACGAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAGAAGAAACCTGGAGGAATCATTGCTCTCCTCGATGAAGCTTGCATGTTCCCAAAATCAACTCATGAAACATTTGCAAACAAGCTTTATCAAACATTTAAGAATCACAAGCGATTTATTAAGCCAAAATTGTCTCGAACGGATTTCACAATCGCTCATTATGCTGGGGAGGTACTATACCAGTCTGAACAATTCTTAGACAAAAACAAGGATTATGTGGTTCCAGAACATCAAGATTTATTGAGTGCTTCCAAATGTTCTTTTGTATCTGGCCTTTTTCCACCACTCCCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAAAGCCTAATGGAGACATTAAATTCTACAGAACCCCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATGTCAACATTATGCAACAACTTCGCTGTGGTGGTGTTTTGGAGGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTGCGTTCTTTGAATTTATAAATAGATTTGGCCTCCTTGCCCCAGAGGCCATGGAAGCAAACTGTGATGAAAAAACTGGTTGCCAAAAGATTCTGGAAAAGATGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAATTAGATGCTCAGAGAGCTCAAGTACTTAGTAATGCAGCAAAAGTTATCCAACGGCGTGTGCGAACCCATCAAGCTCGCAGACATTATCTTGCATTGCGTAAGAAGACCATATACGTGCAGTCTCGGTGGAGAGGAAGACTTGCATGTAAACTCTATGAGCATTTGAGAAGGGAAGCTGCTGCTGTGAAAATTCAGAAGAATATACGCAGATATGAAGCTAGGAAAGCCTATAAAGAACTTCATCTGTCAGTACTAACACTGCAACGAGCTATAAGGGCCACTGCTGCTCGCAAGCAATTCAGATTTAGGAAGCAGACTAAAGCTGCCATCATCATTCAGGCCCGGTGGCGGTGTCATAGAGCTGCCTTATATTATAAGAGGCTAAAGAAAGGTGCAATAGTCACACAGTGCAGATGGAGGGGACGCGTATCCAGGAGAGAACTTAGGAAACTGAAAATGGCGGCAAAAGAAACTGGTGCCTTACAAGAAGCAAAGGATAAACTTGAAAAACGAGTGGAGGAACTAACTTGGCGTCTTCAACTAGAAAAGGGTTTAAAGACCAATTTGGAAGAATCCAAAGCCCAGGAGATAGCAAAATTGCAGAATTCATTGCAGGAGATGCAGAGCAAATTTGAAGAAACTAATGCTCTGCTCATCAAAGAGCGAGAGAATGTAAAGAAAGTTGTCGAAGAAGCACCTCCTGTCGTTCAAGAAACTCAGGTTATTGTTGAAGATACACAGAAGATTGAGACATTGACAGCAGAAATTGAGAGCCTAAAGACTTCACTTGAGTCAGAGAAACAGAAAGCTGATGACTTTGAAAGAAAATACAATGAAGCCCAAGTTTGTAGTGAAGAAAGAGGTAAAAAAGTAGAAGACATGGAGAAGAAGGGTCGTCAGCTTCAAGAATCATTGACTAGGCTAGAAGAGAAGATTACTAATTTAGAATCAGAGAATCAGGTACTACGTCAACAAGCTGTGTCCATGGCACCTAACAAGTTCCTTTCAGGACGTTCAAGATCAATCATCCAGAGAACTGAAAGTGGTCATATTGTACCGGAAGCAAAGACACCTGTGGAAATGCATAGCACATCAATGCACCGGAGGGAACCCTCTGACGGTTTGGATGATAAGCCACAAAAGTCACTAAATGAGAAACAACAGGAGAATCAAGAGTTACTCATCAGATGTATTGCACAACATCTAGGCTTTGCTGGGAACAGACCAATTGCTGCCTGTATCATATACAAATGCCTCTTGCACTGGCGATCGTTTGAAGTTGAGCGTACTAGTGTTTTTGATCGTATCATCCAAACTATTGGCCATGCAATTGAGACCCAGGATAATAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCTACACTTCTCTTGTTACTCCAGCGTACACTGAAGGCTAGTGGTGCTGCTGGAATGGCTCCACAACGCCGTCGTTCTTCATCAGCAACCTTGTTTGGGAGGATGACTCAAAGTTTCCGTGGAACTCCAGCTGGAGTAAATCTTTCCCTAGTCAACGGCAGCGCAAGCAGAGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCTGCTCTGCTATTCAAACAGCAGCTTACAGCATATGTAGAAAAGATATATGGAATGATTCGTGATAATTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCCTTGTTAAGGGGTCATCACGTTCTGTTGCAAACACTGAAGCCCAGCGTGCCTTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTTGGAATCTTTCTCAATACTTTGAAAGCTAATCATGTTCCTCCCTTTTTAGTTCGTAAGGTGTTCACGCAAATTTTTTCCTTCATCAATGTACAATTATTCAACAGTCTTCTTTTACGACGGGAGTGCTGCTCATTTAGCAATGGAGAATATGTCAAAGCTGGTCTGGCTGAATTGGAGCATTGGTGTTATAAGGCAACAGATGAGTATGCAGGTTCTGCCTGGGATGAGCTCAAACATATTAGACAAGCTATTGGATTTCTGGTCATTCATCAGAAACCAAAGAAAACATTGGATGAAATTAGCCATGACCTGTGCCCAGTCCTTAGTATACAGCAACTATATCGGATAAGCACCATGTACTGGGATGACAAATATGGAACGCATAGTGTGTCCTCTGATGTCATATCCAACATGAGAGTATTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATCCCGTTTTCTGTTGATGACATATCGAAATCAATGGAACAGATAGACATTGCAGATATAGAGCCCCCTCCTCTAATTCGTGAAAACTCTGGCTTTAGCTTTTTGTTGCCGCGCCCAGATTGA 4896 0.4067 MATSYPDGYLVNHDRCNFANFMDFEGSKLSHNLNPSYMQHAVVVHGLSLPTNAHWDFGLVWEKGLDSSLMELGYLGSISEIMMPNYETKVINHGMHADISHLGTPVNIIVGSHVWIEDPEVSWIDGQVLKINGKDAEIETTNGKKVNANLSKIYPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQRLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMIIEGKSNSILVSGESGAGKTETTKMLMQYLAFLGGRAGTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPNEEIEKYKLGNPRSFHYLNQSKCYELADISDAREYLATRRAMDIVGISQRDQEAIFRVVASILHIGNIEFTKGKDVDSSVPKDDKAKFHLRTTAELLMCDADALEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINNSIGQDPKSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVLYQSEQFLDKNKDYVVPEHQDLLSASKCSFVSGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGLLAPEAMEANCDEKTGCQKILEKMGLKGYQIGKTKVFLRAGQMAELDAQRAQVLSNAAKVIQRRVRTHQARRHYLALRKKTIYVQSRWRGRLACKLYEHLRREAAAVKIQKNIRRYEARKAYKELHLSVLTLQRAIRATAARKQFRFRKQTKAAIIIQARWRCHRAALYYKRLKKGAIVTQCRWRGRVSRRELRKLKMAAKETGALQEAKDKLEKRVEELTWRLQLEKGLKTNLEESKAQEIAKLQNSLQEMQSKFEETNALLIKERENVKKVVEEAPPVVQETQVIVEDTQKIETLTAEIESLKTSLESEKQKADDFERKYNEAQVCSEERGKKVEDMEKKGRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRTESGHIVPEAKTPVEMHSTSMHRREPSDGLDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGTPAGVNLSLVNGSASRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGIFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDIADIEPPPLIRENSGFSFLLPRPD 1631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01094 1631 Gene3D Kinesin motor domain 166 763 IPR036961 -
Phco6g01094 1631 MobiDBLite consensus disorder prediction 1188 1212 - -
Phco6g01094 1631 CDD MYSc_Myo11 177 821 IPR036018 -
Phco6g01094 1631 Gene3D - 835 885 - -
Phco6g01094 1631 Gene3D - 886 933 - -
Phco6g01094 1631 Gene3D - 934 983 - -
Phco6g01094 1631 Coils Coil 1118 1152 - -
Phco6g01094 1631 Coils Coil 978 1005 - -
Phco6g01094 1631 ProSiteProfiles IQ motif profile. 859 888 IPR000048 GO:0005515
Phco6g01094 1631 FunFam Class V myosin 540 681 - -
Phco6g01094 1631 Coils Coil 1069 1110 - -
Phco6g01094 1631 SMART DIL_2 1449 1556 IPR002710 -
Phco6g01094 1631 Gene3D - 768 831 - -
Phco6g01094 1631 SMART MYSc_2a 158 834 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 PRINTS Myosin heavy chain signature 250 275 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 PRINTS Myosin heavy chain signature 530 558 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 PRINTS Myosin heavy chain signature 583 611 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 PRINTS Myosin heavy chain signature 193 212 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 PRINTS Myosin heavy chain signature 297 324 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 Coils Coil 1013 1051 - -
Phco6g01094 1631 Pfam IQ calmodulin-binding motif 838 856 IPR000048 GO:0005515
Phco6g01094 1631 Pfam IQ calmodulin-binding motif 886 905 IPR000048 GO:0005515
Phco6g01094 1631 Pfam IQ calmodulin-binding motif 957 976 IPR000048 GO:0005515
Phco6g01094 1631 Pfam IQ calmodulin-binding motif 933 953 IPR000048 GO:0005515
Phco6g01094 1631 Pfam Myosin head (motor domain) 165 821 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 Gene3D Myosin VI head, motor domain, U50 subdomain 413 702 - -
Phco6g01094 1631 Gene3D - 540 724 - -
Phco6g01094 1631 ProSiteProfiles IQ motif profile. 907 936 IPR000048 GO:0005515
Phco6g01094 1631 Gene3D - 353 411 - -
Phco6g01094 1631 SMART iq_5 835 857 IPR000048 GO:0005515
Phco6g01094 1631 SMART iq_5 858 880 IPR000048 GO:0005515
Phco6g01094 1631 SMART iq_5 931 953 IPR000048 GO:0005515
Phco6g01094 1631 SMART iq_5 883 905 IPR000048 GO:0005515
Phco6g01094 1631 SMART iq_5 954 976 IPR000048 GO:0005515
Phco6g01094 1631 SMART iq_5 906 928 IPR000048 GO:0005515
Phco6g01094 1631 PANTHER MYOSIN 155 1562 - -
Phco6g01094 1631 ProSiteProfiles Myosin motor domain profile. 163 833 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 FunFam unconventional myosin-Va 934 982 - -
Phco6g01094 1631 Pfam Myosin N-terminal SH3-like domain 110 151 IPR004009 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 ProSiteProfiles IQ motif profile. 836 863 IPR000048 GO:0005515
Phco6g01094 1631 ProSiteProfiles Dilute domain profile. 1261 1574 IPR002710 -
Phco6g01094 1631 FunFam Myosin 2 413 528 - -
Phco6g01094 1631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 886 IPR027417 -
Phco6g01094 1631 FunFam unconventional myosin-Va 838 886 - -
Phco6g01094 1631 FunFam Myosin heavy chain 353 408 - -
Phco6g01094 1631 ProSiteProfiles IQ motif profile. 932 958 IPR000048 GO:0005515
Phco6g01094 1631 ProSiteProfiles IQ motif profile. 955 984 IPR000048 GO:0005515
Phco6g01094 1631 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 109 158 IPR004009 GO:0003774|GO:0005524|GO:0016459
Phco6g01094 1631 MobiDBLite consensus disorder prediction 1185 1213 - -
Phco6g01094 1631 ProSiteProfiles IQ motif profile. 884 913 IPR000048 GO:0005515
Phco6g01094 1631 CDD MyosinXI_CBD 1212 1597 IPR037975 GO:0007015
Phco6g01094 1631 Pfam DIL domain 1450 1553 IPR002710 -
Phco6g01094 1631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 886 984 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01094 Phco-Chr6 11030995 11046129 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01094 6 11030995 11046129 Phco6g01094 6 11030995 11046129 ECH
Phco2g01927 2 49875985 49899392 Phco6g01094 6 11030995 11046129 PCT
Phco11g01332 11 10070578 10083848 Phco6g01094 6 11030995 11046129 PCT