Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00681 ATGGAGTTGTATGAGAATTCAGATGTTGTGCAGTGGGGTATTAATCTTTTTGGCTGTGACCCTGCTTATAGCCCTGGATACTATTGTGACATAATTCAGCCTAATACTGGTGATGTCTATAATAATGGGCACAACTTCCACAGCCATTATGCTACTCAACATAACCAAATAGAGAACGACGAGATCATTGCACGAGCTCTTCAAGAACAATTTTCACAAGTAGATATTGCTGATTGTTCAAGATATTCACAGACAAATGAAGAACAGTTCCATGCTTCTGAGCCCACATATGATTGGCATAACACATCGATGATGTATTGTTCAGGAGGTCATGATTATACCTACGATGGAATTGGGGACATAAAATCTTCTAGTTCATTATGTTGTAGGCCTTCTGAAGCAGAGGAAAGCTCATTGGAGCTAACTGACAATTATCCACTTGATGATGAAATAGGGAGGAAATTGAGTCAGATGGTTCCAATTCCTCATGTTCCAAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCATACGGTACAAGGTGATGGTAATTGTCAGTTCCGTGCATTATCTGATCAGTTGTTTGACACACCTGATCACCACAACAATGTGAGACAACAAGTTGTGAACCAGCTAAGGTCTCATCCAGAGATTTATGAGGGATATGTTCCCATGGAATATGGCGAATATTTGGAGAAAATGTCTAAGAGTGGTGAATGGGGGGATCATGTCACTCTTCAAGCAGCGGCAGATTCGTATGGTGTTAGAATATTTGTGGTGACTTCTTTCAAGGACACCTGTTGCATAGAGATTCTTCCTAATTTTGAGAATCCAAGAGGAGTGATTTTTCTTAGTTTTTGGGCAGAGGTGCATTACAACTCCATCTATCCTCAAGGAGATGCTTTCAAGAAAAACAAACCTATTGACCCAGATATACCTTCAAGTGACTCAAAAAAGAAGAAAAGATGGTGGAACTTTGGGACCAAACATTAA 1050 0.3943 MELYENSDVVQWGINLFGCDPAYSPGYYCDIIQPNTGDVYNNGHNFHSHYATQHNQIENDEIIARALQEQFSQVDIADCSRYSQTNEEQFHASEPTYDWHNTSMMYCSGGHDYTYDGIGDIKSSSSLCCRPSEAEESSLELTDNYPLDDEIGRKLSQMVPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHTVQGDGNCQFRALSDQLFDTPDHHNNVRQQVVNQLRSHPEIYEGYVPMEYGEYLEKMSKSGEWGDHVTLQAAADSYGVRIFVVTSFKDTCCIEILPNFENPRGVIFLSFWAEVHYNSIYPQGDAFKKNKPIDPDIPSSDSKKKKRWWNFGTKH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00681 349 CDD OTU_plant_OTU9-like 184 315 - -
Phco6g00681 349 Gene3D - 174 322 - -
Phco6g00681 349 PANTHER OTU DOMAIN CONTAINING PROTEIN 53 320 - -
Phco6g00681 349 MobiDBLite consensus disorder prediction 325 341 - -
Phco6g00681 349 FunFam OTU domain-containing protein 175 321 - -
Phco6g00681 349 Pfam OTU-like cysteine protease 199 285 IPR003323 -
Phco6g00681 349 SUPERFAMILY Cysteine proteinases 179 318 IPR038765 -
Phco6g00681 349 ProSiteProfiles OTU domain profile. 193 317 IPR003323 -
Phco6g00681 349 MobiDBLite consensus disorder prediction 325 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00681 Phco-Chr6 6801513 6804600 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00681 6 6801513 6804600 Phco2g02042 2 51141187 51149773 ECH
Phco6g00681 6 6801513 6804600 Phco6g02171 6 42710650 42717505 ECH
Phco6g00681 6 6801513 6804600 Phco6g00681 6 6801513 6804600 ECH
Phco2g02042 2 51141187 51149773 Phco6g00681 6 6801513 6804600 PCT