Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02042 ATGTTAATTTGTCTTGATTTCACCTCAACAACCCCTTTTTCCTTCTTCTTCTCTGCGCTTTCTCAATTCAATCCTCGGAGGAGGCGCATTTTGATTCGTTCAATTGAAAAGGAGAACAAAGTGGACGGGCTTTCCTTTGATGATGTAATGATATTGGGTGAGATGGTTTTATATGAGCATTCAGATGTTTTTCAGTGGGGTCTTAATCTTCTTGATGGTGACCCTGCTTATAGTCCTGGATACTATGGCAACATAATTCAACATGATACTGGAGATATCTATAATGGACACTACTTCCATAGCCATTATGATAATGAATGTAACCATGTAGAGAATGATGAGATCATTGCCCGTACACTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAATCTTCAGGATATTTACAGGAAGGTGAACAACAGTTCCATGTTCCTGAGACTCAACCTGCATATGATTGGCATAACTCTTCAATGATGAACTACTGTTCAGGAGATCATGATTATGCCCAAGAAGGAGTTGGTGATGGAGAACCCTCTAGTTCATGTTCTAGTCCTCGTGAAACAGAGGAATATTCATTAGAGCTAACTGACAATTATCCACTTGATGATGAAGTTGGGAGGAGATTGAGTCAAATGATACCGATTCCTCATGTTCCAAAAATTAATGGTGAAATTCCTTCAATTGACGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCACAAAGTACAAGGTGACGGTAATTGTCAGTTTCGAGCACTGTCTGATCAATTGTATCACGCACCTGATCACCACAAGTTTGTGAGACGACAAGTTGTCAATCAGCTTAAATCTAATCCAGAGATTTATGATGGATATGTTCCCATGGAATATGATGATTATTTGGACAAGATGTCTAAGAGTGGCGAATGGGGTGATCATGTTACTCTCCAAGCAGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAACCCAAAAGGAGTGATTTTCCTGAGTTTCTGGGCAGAGGTACACTACAACTCGATTTATCCCCAAGGAGATATAACATCAAATGAGTCTAGAAAGAAGAAAAGGTGGTGGAGCTTTGGCAGCAAGCATTAG 1182 0.3985 MLICLDFTSTTPFSFFFSALSQFNPRRRRILIRSIEKENKVDGLSFDDVMILGEMVLYEHSDVFQWGLNLLDGDPAYSPGYYGNIIQHDTGDIYNGHYFHSHYDNECNHVENDEIIARTLQEEFSQLEIAESSGYLQEGEQQFHVPETQPAYDWHNSSMMNYCSGDHDYAQEGVGDGEPSSSCSSPRETEEYSLELTDNYPLDDEVGRRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHKVQGDGNCQFRALSDQLYHAPDHHKFVRRQVVNQLKSNPEIYDGYVPMEYDDYLDKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFENPKGVIFLSFWAEVHYNSIYPQGDITSNESRKKKRWWSFGSKH 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02042 393 ProSiteProfiles OTU domain profile. 248 372 IPR003323 -
Phco2g02042 393 Pfam OTU-like cysteine protease 254 340 IPR003323 -
Phco2g02042 393 PANTHER OTU DOMAIN CONTAINING PROTEIN 108 374 - -
Phco2g02042 393 Gene3D - 229 378 - -
Phco2g02042 393 CDD OTU_plant_OTU9-like 239 370 - -
Phco2g02042 393 SUPERFAMILY Cysteine proteinases 234 372 IPR038765 -
Phco2g02042 393 MobiDBLite consensus disorder prediction 170 194 - -
Phco2g02042 393 FunFam OTU domain-containing protein 230 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02042 Phco-Chr2 51141187 51149773 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02042 2 51141187 51149773 Phco6g02171 6 42710650 42717505 ECH
Phco2g02042 2 51141187 51149773 Phco2g02042 2 51141187 51149773 ECH
Phco6g00681 6 6801513 6804600 Phco2g02042 2 51141187 51149773 ECH
Phco2g02042 2 51141187 51149773 Phco6g00681 6 6801513 6804600 PCT