Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00701 ATGGAGATCTTGGTTTTACCTGGAACACTTGCTTGCTTTGCTATATTACCTCTTCTTTTTCTCTTCAAACTAACGTTTTCTTGGTGGATTTCTCCCATCCAAACTCATCTTAAGCTCAAAAGATGTGGATTTGGAGGGCCACCCCCAACTTTTCCTCTTGGGAACATTCAAGAGATGAAAAACAACAATAGTGTTAGCTCTTCACTACTTTCCTCTAACCTCACCCACGATATTCACTCCACTGTCTTCCCCTACTTTTCTCGGTGGCAAAACTCTCACGGGAAGGTGTTTATCTACTGGTTGGGTACAGAACCGTTTTTGTACATTGCTGATTCAGAATTTTTGAAAAAAATGTCCACTGCGGTTTTGGCCAAGAAATGGGGAAAACCTAAAGTGTTTAGACATGACAGAGACCCTTTGTTTGGAAATGGTTTGATTATGGTTGAAGGGAATGAATGGGTTCGTCACCGACATGTTATAGCACCAGCATTTTCTCCTCTTAACCTGAAGGCAATGGCAAGCATGATGAGTGAGTCTACAAATCAAATGATAGAAAGGTGGATTGCACAAATAAACTCAGGTAATCCCGAAATCGATGTGGAAAAGGAGGTTGTAGAAACTGCAGGAGAAATCATCGCAAAAACAAGCTTTGGCATGAAGGGAAAATATGCAAAGGAAGTGTCTGAAAAGCTGCGTGCCCTACAAATGGAACTTTTCAGTACAACAAGATATGTAGGGGTCCCATTTGAGAAGTGTTTGAACGTCAAGAAAACCCTAAAGGCCAAGAAACTTGGGAAAGAGATTGATAAACTTTTGCTATCTGTCATAACATCTCGCATGAAATCAGTGAAAAGACAAACTCAAGAAGACCTATTGGGGTTGCTGTTGCAAGGAAATCATCAAGGTGATGGGAAGTTAGGGAAGACATTCACCACTAGAGATTTGTTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAGACAACAGCATTGGCTATCTCATGGACCTTGTTGCTTCTTGCTATGCATCAAGATTGGCAAATCCAGTTAAGAGATGAGATCAGAGAAGTGGTCGGTGATAAAGAACTTGATATCAACGTGCTTGCCGGCTTGAAAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGGCTCTACCCAACGGCTCCAAATGTGCAAAGGCAAGCAAGAGAAGACATTCAAGTTGATAATTTAAAGGTGCCTAATGGCACCAACATGTGGATTGATGTTGTGGCAATGCACCATGATCAAGCATTGTGGGGAAAAGATGTGAATGAGTTTAAACCAGAGAGGTTCATGAATGATGTCAATGGTGGATGTAACCACAAAATGGGGTACTTGCCTTTTGGATTTGGAGGGAGGACATGTGTTGGAAGAAACTTGAGCTTCATGGAGTATAAGATAGTGCTAACCCTACTTCTCTCTAGATTTAGCTTTAAAGTTTCCCCAAGTTATAACCATTCACCCTCTATCATGCTCTCCCTTAGGCCAACTCATGGACTTCATCTCTTAGTTCAACCCCTTTATTAA 1551 0.4139 MEILVLPGTLACFAILPLLFLFKLTFSWWISPIQTHLKLKRCGFGGPPPTFPLGNIQEMKNNNSVSSSLLSSNLTHDIHSTVFPYFSRWQNSHGKVFIYWLGTEPFLYIADSEFLKKMSTAVLAKKWGKPKVFRHDRDPLFGNGLIMVEGNEWVRHRHVIAPAFSPLNLKAMASMMSESTNQMIERWIAQINSGNPEIDVEKEVVETAGEIIAKTSFGMKGKYAKEVSEKLRALQMELFSTTRYVGVPFEKCLNVKKTLKAKKLGKEIDKLLLSVITSRMKSVKRQTQEDLLGLLLQGNHQGDGKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLLLLAMHQDWQIQLRDEIREVVGDKELDINVLAGLKKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLKVPNGTNMWIDVVAMHHDQALWGKDVNEFKPERFMNDVNGGCNHKMGYLPFGFGGRTCVGRNLSFMEYKIVLTLLLSRFSFKVSPSYNHSPSIMLSLRPTHGLHLLVQPLY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00701 516 Pfam Cytochrome P450 81 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 SUPERFAMILY Cytochrome P450 76 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 Gene3D Cytochrome P450 30 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 507 - -
Phco5g00701 516 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco5g00701 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00701 Phco-Chr5 7507725 7511335 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00701 5 7507725 7511335 Phco5g00701 5 7507725 7511335 ECH
Phco5g00701 5 7507725 7511335 Phco6g02471 6 46123951 46126450 PCT
Phco6g02472 6 46139446 46141455 Phco5g00701 5 7507725 7511335 PCT