Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02471 ATGGAGTTTCTAGGGCTAGCTGGGGTTTTTGTTGCCTTCTTGGGACTACTTTGCCTCTTCTTGCTCTTGATACTAACATTTTCTTGGTGGGTTTTCCCTAACCAAACACTTAAGAAGCTTAAGAAATGTGGGTTGGGAGGACCAATCCCAAGTTTTCCTCTTGGAAACATTAAAGAGATGAAAAGAAAGAATAACATTCAATCTTCAGTTGTATCCTCGAATCTCACTCATGATATACACTCTAACGTTTTCCCCTATTTTTCTAGCTGGCAGAAATCACATGGTAAGATTTTTGTGTACTGGTTGGGCACGGAGCCATTCCTGTACGTTGCAGAGCCAGAGTTCTTGAAGAAAATGTCGACATTGGTGATGGCCAAGCGATGGGGAAAACCAAGTGTGTTTAGAACTGACAGAGACCCCATGTTTGGGAGTGGTTTGGTCATGGTTGAGGGCAACGACTGGGTTCGTCACAGGCACATTGTTGCCCCCGCGTTCAATCCCATTAACTTGAAGGACATGGCAAACATGATGGTTGATTCGACGAATCAAATGATAGACAGATGGTTTACCCAAATAAACTCTGGCAACCCCGAAATTGACGTGGAAAGAGAGATTATAGCAACAGCTGGAGAGATCATAGCAAGAACAAGTTTTGGCATGAAAGATGAGAATGCAAGAGATGTTTTCGACAAACTACGAGCCTTGCAAATGACACTTTTTAAGACCAATCGATATGTAGGTGTTCCCTTTGGCAAGTATTTCAACGTAAAGAAAACCTTAGAGGCCAAGAAACTGGGGAAAGTAATCGATGAGCTCTTGTTGTCCATCATAGAATCTCGGAAGAAGTTACCGACGAAAAATTCTCAACGAGATTTGTTAGGTTTGTTGCTACAAGAAAATCACCAGGTTGATGGACGGTTAGGGAAGACGTTAACATCGCGAGAAGTTGTTGATGAATGCAAGACCTTCTTCTTTGGAGGCCATGAAACCACAGCACTTGCCATCACATGGACTTTGTTGCTTCTAGCCATGCACCAAGATTGGCAAAACCAGCTGAGAGATGAGATACGAGATGTGGTGGGGAACACCCAAGAACTTGATATTTCTATGCTCGCTGGTTTAAAAAAGATGAAGTGCGTGATGAATGAAGTTCTAAGACTGTACCCACCAGCACCAAATGTGCAAAGGCAAGCCAGAGAAGACATAAAGGTTGATGATATAACAGTGCCTAATGGAACGAACATGTGGATAGATGTGGTGGCCATGCACCACGACCCTGAACTATGGGGAAAGGATGCGAATGAGTTCAGACCAGAGAGGTTCATGGATGATGTGAATGGTGGATGCAAGCACAAGATGGGGTATTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGGAATTTGACCTTCATGGAGTACAAGATTGTGTTAACCCTTCTTCTCTCTAGGTTTACTTTTAAGGTTTCTCCTCATTACAAACATTCACCATCTATTATGCTCTCCCTAAGGCCAAGCTATGGTCTTCCACTCATTGTTCACCCACTTTAG 1554 0.4324 MEFLGLAGVFVAFLGLLCLFLLLILTFSWWVFPNQTLKKLKKCGLGGPIPSFPLGNIKEMKRKNNIQSSVVSSNLTHDIHSNVFPYFSSWQKSHGKIFVYWLGTEPFLYVAEPEFLKKMSTLVMAKRWGKPSVFRTDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKDMANMMVDSTNQMIDRWFTQINSGNPEIDVEREIIATAGEIIARTSFGMKDENARDVFDKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKVIDELLLSIIESRKKLPTKNSQRDLLGLLLQENHQVDGRLGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHQDWQNQLRDEIRDVVGNTQELDISMLAGLKKMKCVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNMWIDVVAMHHDPELWGKDANEFRPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKVSPHYKHSPSIMLSLRPSYGLPLIVHPL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02471 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 SUPERFAMILY Cytochrome P450 77 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 Gene3D Cytochrome P450 29 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 Pfam Cytochrome P450 80 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02471 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Phco6g02471 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02471 Phco-Chr6 46123951 46126450 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02471 6 46123951 46126450 Phco6g02471 6 46123951 46126450 ECH
Phco5g00701 5 7507725 7511335 Phco6g02471 6 46123951 46126450 PCT