Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02472 ATGGAGTTTGTAGGGCTATGCGGGGTTCTTGTTGCCTTCTATGTACTACTTTGCCTCTTCTTCTTCTTCATACTAACTTTTTCTTGGTGGGTTTTCCCTAACCAAAAACTTAAGATGCTTAAGAAATGTGGGTTGGGAGGGCCAACCCCAAGTTTTCCACTTGGGAACATTGAAGAGATGAAAAGAAACAGTATCATTCAATCTTCAGTTGTTTCCTCAAATCTCTCACACGATATACACTCTTCCGTTTTCCCTTACTTCTCTAGCTGGCAGAAATCTCATGGTAAGGTGTTCGTATACTGGTTGGGCACGGAGCCATTTTTGTACATTGCAGAGGCAGAGTTTTTGAAGAAAATGTCGACAGTGGTGATGGCCAAGAGATGGGGCAAGCCAAGTGTGTTTAGAAATGACAGAGACCCTATGTTTGGGAGTGGTTTGGTAATGGTTGAGGGTAATGATTGGGTTCGTCAGAGGCACATTGTTGCTCCCGCATTCAATCCCATTAACTTGAAGGGAATGGCAAATATGATGGTTGAATCTACGAATCAAATGATAGATAGATGGGTTACCCAAATAAACTCTTTCAACCCTGAAATCGACGTGGAGAGAGAGATTGTAGCAACAGCTGGAGAGATCATAGCAAGAACAAGTTTTGGCATGAAAGACGATAATGCAAGAGATGCGATTGTTAAATTACGAGCCTTGCAAATGACACTCTTCAAAACCAATCGGTATGTAGGGGTTCCCTTTGGCAAGTATTTCAATGTGAAGAAAACGTTAGAGGCCAACAAACTTGGGAAAGAACTCGACGAGCTCTTGTTGTCCATCATAGAAGCTCGGAAGAATTCACCCACCAAAAATTCTCAACAAGATTTGTTAGGTTTGTTGCTGAAAGAAAATCATCAGGTTGATGGACGGTTAGGGAAGACGTTAACATCGCGAGAAGTTGTCGATGAATGCAAGACCTTCTTCTTCGGAGGCCATGAAACCACAGCACTTGCCATCACATGGACCTTGTTGCTTCTAGCCATGCACCAAGATTGGCAAGACCAGTTGAGAGACGAGATACGAGAAGTGGTGGGTGGTGGTGACAAGCTTGATATCACATTGCTCTCTGGTTTAAAGAAGATGAAGTGCGTGATGAATGAAGTTCTAAGACTATACCCACCAGCACCAAATGTGCAAAGGCAAGCTAGAGAAGACATTAAGGTTGATGATATAACAGTGCCTAATGGAACGAACATGTGGATAGATGTGGTGGCCATGCACCACGACCCTGAACTATGGGGAAAGGATGCGAATGAGTTCAAACCAGAGAGGTTCATGGATGATGTGAATGGTGGATGCAAGCACAAGATGGGGTATTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGGAATTTGACCTTCATGGAATACAAGATTGTGTTAACCCTTCTTCTCTCTAGGTTTACTTTTAAGGTTTCTCCTCATTACAAACATTCACCATCTATTATGCTCTCCTTAAGGCCAACTCATGGACTTCCACTCATAGTTCAGCCCCTTTAG 1554 0.4311 MEFVGLCGVLVAFYVLLCLFFFFILTFSWWVFPNQKLKMLKKCGLGGPTPSFPLGNIEEMKRNSIIQSSVVSSNLSHDIHSSVFPYFSSWQKSHGKVFVYWLGTEPFLYIAEAEFLKKMSTVVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRQRHIVAPAFNPINLKGMANMMVESTNQMIDRWVTQINSFNPEIDVEREIVATAGEIIARTSFGMKDDNARDAIVKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEANKLGKELDELLLSIIEARKNSPTKNSQQDLLGLLLKENHQVDGRLGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHQDWQDQLRDEIREVVGGGDKLDITLLSGLKKMKCVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNMWIDVVAMHHDPELWGKDANEFKPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKVSPHYKHSPSIMLSLRPTHGLPLIVQPL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02472 517 Coils Coil 262 282 - -
Phco6g02472 517 Gene3D Cytochrome P450 29 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Phco6g02472 517 SUPERFAMILY Cytochrome P450 80 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco6g02472 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 509 - -
Phco6g02472 517 Pfam Cytochrome P450 82 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02472 Phco-Chr6 46139446 46141455 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02472 6 46139446 46141455 Phco5g00701 5 7507725 7511335 PCT