Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00748 ATGACGCGCACACTCAGAATTCTCAAATCTGCGGATAACGCCGCGGTGGCAGCGGCGGCTCCGCCGCCGGAGGCGGTAGCGCTCGAGTCCGATTTCGTGGTGATTCTGGCAGCTCTCCTGTGCGCTTTAATCTGCGTGGTGGGGCTTGTTGCGGTGGCGCGGTGCGCGTGGCTCCGGCGAGGTCCCGGCGGCGGAAACTCGCCGCGGCAGGCGGTGGTGAACAAGGGCCTGAGGAAGAAGGTGCTGCAGTCGCTGCCGAAGTTCGCGTACGTGGACAGCAACCCGAGCAAGTGGGTGGCGACGTCGGAATGCGCGATTTGCCTGGGTGATTTCGCCGCCGGCGACGAGATTCGCGTGCTGCCGCAGTGCGGCCACGGCTTCCACGTCTTCTGCATCGACAAGTGGCTGGCGTCCCGCTCCTCCTGCCCTTCCTGCCGCCAGGTCCTCGCTGTCGCCAGGTGTCAGAAGTGCGGCCGCTTTCCGGCCACGGCTGCCGGAGCCTCGAGAAGCGGCGCCAGTGAACTGGAATTGAAGTCCAGAGAAGACAACAATGCTGCTTCAATCGGTAATTGCAATAATAACAACGGTGATGGCGGTGGAAGTGGTGATAACGTGAATGATCATCATAGCCACCACTTGAACAGTGGGTTCTTGCCATGA 660 0.6197 MTRTLRILKSADNAAVAAAAPPPEAVALESDFVVILAALLCALICVVGLVAVARCAWLRRGPGGGNSPRQAVVNKGLRKKVLQSLPKFAYVDSNPSKWVATSECAICLGDFAAGDEIRVLPQCGHGFHVFCIDKWLASRSSCPSCRQVLAVARCQKCGRFPATAAGASRSGASELELKSREDNNAASIGNCNNNNGDGGGSGDNVNDHHSHHLNSGFLP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00748 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 151 IPR013083 -
Phco4g00748 219 MobiDBLite consensus disorder prediction 197 219 - -
Phco4g00748 219 SMART ring_2 104 145 IPR001841 -
Phco4g00748 219 SUPERFAMILY RING/U-box 83 151 - -
Phco4g00748 219 CDD RING-H2_EL5-like 103 146 - -
Phco4g00748 219 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Phco4g00748 219 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 21 158 - -
Phco4g00748 219 Pfam Ring finger domain 103 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00748 Phco-Chr4 5767928 5768587 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00748 4 5767928 5768587 Phco4g00748 4 5767928 5768587 ECH
Phco4g00748 4 5767928 5768587 Phco7g01689 7 16754702 16755382 ECH
Phco4g00748 4 5767928 5768587 Phco8g00314 8 2896425 2897024 PCT