Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00314 ATGACACGCGGGCTCAGACTCCTCCAATCCCAGGCGGTGCCTCCACCAGAAGCCGCTGCCGCCGTCGAGTCCGACTTCGTGGTGATCCTGGCGGCGCTCCTCTGCGCGCTCATTTGCGTGGTGGGCCTCGTCGCCATCGCACGCTGCGCCTGGCTCCGTCGGCCTCCAGCCTCCGTCGGCGGCGGTGGATCCCCGCCTGCACCGGCGAACAAGGGCCTGAAGAAGAGAGTGGTGAACTCGCTTCCGAAGTTCACGTACGCCGGTGAAAGTGATCATTGTAAGTGGTCGGAGTGTCCGATCTGCCTGATGGAGTTTTCCGGCGGCGAAGAGGTCCGCGTGCTGCCGCAGTGCGGGCACGGGTTCCACGTTGCGTGTGTGGACACGTGGCTCTCATCGCACTCCTCATGCCCCTCTTGCCGCGCACCCTTCGTCGTCGCCCGCTGCCAGAAGTGCGGCCACTTCCCGGCTGTCGCCGCCGAAACCAGCGAACCGGACGCAAAGCCCGGTGGCGGCTGCAATGGCGATGATAACAGGAATGCCGATGATGATAGGAATGTAAATGTTACCCCCGGGTTTAGTAATTACGGTTTCTTGCCATGA 600 0.6317 MTRGLRLLQSQAVPPPEAAAAVESDFVVILAALLCALICVVGLVAIARCAWLRRPPASVGGGGSPPAPANKGLKKRVVNSLPKFTYAGESDHCKWSECPICLMEFSGGEEVRVLPQCGHGFHVACVDTWLSSHSSCPSCRAPFVVARCQKCGHFPAVAAETSEPDAKPGGGCNGDDNRNADDDRNVNVTPGFSNYGFLP 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00314 199 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 16 152 - -
Phco8g00314 199 SUPERFAMILY RING/U-box 78 146 - -
Phco8g00314 199 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Phco8g00314 199 CDD RING-H2_EL5-like 97 140 - -
Phco8g00314 199 SMART ring_2 98 139 IPR001841 -
Phco8g00314 199 Pfam Ring finger domain 97 140 IPR001841 -
Phco8g00314 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 153 IPR013083 -
Phco8g00314 199 MobiDBLite consensus disorder prediction 160 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00314 Phco-Chr8 2896425 2897024 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00748 4 5767928 5768587 Phco8g00314 8 2896425 2897024 PCT