Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00747 ATGATGGAGGTTGTGATTGTTGCACTTGCGGCTACAATTGGGAATCTTCTGATGGGATGGGATAGTTCAACTATTGCAGCTGGTATGACCTACATCAAGAAGGACTTCGTTTTTGATGCGACAATTGAAGGGCTAATTATGTCCATGTCGTTTATAACCGGTACTATTGTGACAATATTCTCTGGGGCAGTGTCTGATATGGTTGGAAGACGCCCTATGCTGATAACATCTTCTGTTATGTTTTTCCTAAGTGGTTTGGTAATGTTTTGGGCTCCTAATGTAGCTGTTATTCTGGTAGCGAGGATAGTGAATGGGGTTGCCATTGCTCTGGCTGTTACTCTTAATCCTCTCTACATATCTGAGGTAGCACCGGCCGATATCAGAGGCCAATTGAACACTTTTACTCAGTTTGCTTGCTCTGGTGGAATGTTTTTGGCTTACATTATGGTGTTCTCAATGTCCTTGACTGACTCACCAAGTTGGAGACTCATGCTTGGAGTTATTTCAATTCCTGCTGTTGCCTACTTTTTACTGGCTGTGTTTTACCTTCCTGAGTCTCCTAGATGGCTTGTGAGCAAAGGCCGGCTACTTGAGGCTGAAAGAGTTCTGAAAAGGCTTCGTGGCACAGATGATGTTTCAGGGGAATTGGCTTTGCTGGCTGAGGGTCTCAGCCCTGGAGGTGAAGCCACTTCCATAGAAGAGTATGTAGTTGCCCCAGCTAGCGAGATTCTTGTTAACCAGGAAGCAGGGAAAGATTATATAAAATTATATGGTCCCAATGAGGGGGTTACAATGGTTGCTCAACCAGTGAATGGACAGGGTAGCTTGATATCCCGTAGTATGTTGTCTCAACAAGGAAGCTTTGGAGCTCTCACAAGTACTGGTCTTAAGGATCCTATTGTCACTCTCTTCGGAAGTTTGCATGAGAATACTCTCCCTGAGAGTGGAGGTTCACGCAGCATGCTAATTCATAATGCCAACAGTATCTTTAGCATGGGCGAGCCAGAGTCCAGTCCCTTTGGTACCAGTGACAACCTGCATGCGCCACTGATGTCATTTCAAGGGGGTGGTGGTGAAAGGGCTTACGGATCCAAGGACATGTTGGGTATGAGGAGCAATAGCAGCCTGAGAAGCAATAGTAGTTTGGCTCATGGGAATGCGGTTGAAACTCCTAAAAATACAAACATTGGTGGAGGTTGGCAGTTGGTTTATAAATCAGCTGATGGTGTTGGGGGTGGGAAAAGAGAAGGGCTCCAAAGGGTTTATTTGCATGCAGAACCTTCCGCAGTATCTCACTCTCAGCATGCTTCATCATTTGTTTCAACTTCTGGCTATGACATACCAATAGACGGTGGTGAAGCGTATCAAGCTGCTGCTCTTGTCAGTCAGTCAGTTCTAGGAACTCATGATTTGTTGCATCTGCCAGAAGTTACTGCAAAAGGCTCAAAATGGAGAGCTCTGCTAGAACCAGGAGTCAAGCGTGCATTAGTTGTTGGCATAGGACTTCAAGTTCTTCAACAGGCTGCTGGCATAAATGGGTTTCTGTACTATGCTCCCCAGATTCTTGAGCAGGCAGAAATAGGATCTCTTTTATCAAATTTGGGCCTTAGTTCAGCATCTTCTTCTTTTCTTGTAAATGTCATTACAACATTCTGTATGCTTCCTTGTATAGCTCTTGCAATAAGACTCATGGATATTTCTGGCAGGAGGTCAATCATGCTGTACACAGTACCCATTTTGATAGTTTGTCTCCTGGCACTAATAATCAAGCAGTTCTTGGAACTAAATTCTGTCATCAATGCTGCAATCACTTTTATTAGTGTTGTGGTTTATGAAAGCGTCTTCTGCATGGGCTTAGGCGTTATTCCAAACATCATATGTGCTGAAATCTTTCCAACAAGTGTTCGTGGAATCTGCATTTCCCTGACTTCTCTCACATATTGGGGTTGTACCTTGATTATCACCTTAATATTCCCCACCTTGCTCCAGCTTCTCGGTCTCCCTGGTGTCTTTGGATTATTTGTTGTTGGCTGCATCATTACATGGATATTTGTCTACGTGAAAGTTCCTGAAACAAAAGGCATGCCTTTAGAAGTTATTACTGAATTTTTTGCTATTGGTGCAAAGCCTGGTACTGATCCTGCAGCAATTGGAATCAAATAG 2163 0.4383 MMEVVIVALAATIGNLLMGWDSSTIAAGMTYIKKDFVFDATIEGLIMSMSFITGTIVTIFSGAVSDMVGRRPMLITSSVMFFLSGLVMFWAPNVAVILVARIVNGVAIALAVTLNPLYISEVAPADIRGQLNTFTQFACSGGMFLAYIMVFSMSLTDSPSWRLMLGVISIPAVAYFLLAVFYLPESPRWLVSKGRLLEAERVLKRLRGTDDVSGELALLAEGLSPGGEATSIEEYVVAPASEILVNQEAGKDYIKLYGPNEGVTMVAQPVNGQGSLISRSMLSQQGSFGALTSTGLKDPIVTLFGSLHENTLPESGGSRSMLIHNANSIFSMGEPESSPFGTSDNLHAPLMSFQGGGGERAYGSKDMLGMRSNSSLRSNSSLAHGNAVETPKNTNIGGGWQLVYKSADGVGGGKREGLQRVYLHAEPSAVSHSQHASSFVSTSGYDIPIDGGEAYQAAALVSQSVLGTHDLLHLPEVTAKGSKWRALLEPGVKRALVVGIGLQVLQQAAGINGFLYYAPQILEQAEIGSLLSNLGLSSASSSFLVNVITTFCMLPCIALAIRLMDISGRRSIMLYTVPILIVCLLALIIKQFLELNSVINAAITFISVVVYESVFCMGLGVIPNIICAEIFPTSVRGICISLTSLTYWGCTLIITLIFPTLLQLLGLPGVFGLFVVGCIITWIFVYVKVPETKGMPLEVITEFFAIGAKPGTDPAAIGIK 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00747 720 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 693 IPR020846 GO:0022857
Phco4g00747 720 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco4g00747 720 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco4g00747 720 PRINTS Sugar transporter signature 628 640 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco4g00747 720 PRINTS Sugar transporter signature 605 626 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco4g00747 720 PRINTS Sugar transporter signature 506 516 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco4g00747 720 FunFam Monosaccharide-sensing protein 3 2 247 - -
Phco4g00747 720 Gene3D MFS general substrate transporter like domains 476 710 IPR036259 -
Phco4g00747 720 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco4g00747 720 Gene3D MFS general substrate transporter like domains 2 246 IPR036259 -
Phco4g00747 720 SUPERFAMILY MFS general substrate transporter 9 698 IPR036259 -
Phco4g00747 720 FunFam Monosaccharide-sensing protein 3 463 706 - -
Phco4g00747 720 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 4 705 - -
Phco4g00747 720 Pfam Sugar (and other) transporter 481 704 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco4g00747 720 Pfam Sugar (and other) transporter 7 219 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00747 Phco-Chr4 5753033 5756712 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00747 4 5753033 5756712 Phco4g00747 4 5753033 5756712 ECH
Phco7g00015 7 97120 102212 Phco4g00747 4 5753033 5756712 ECH
Phco8g00313 8 2887582 2890943 Phco4g00747 4 5753033 5756712 ECH
Phco4g00747 4 5753033 5756712 Phco8g00313 8 2887582 2890943 PCT