Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco8g00313 | ATGAGGGAGGTTGTGATTGTTGCCATTGCTGCTACAGTTGGGAATGTTCTGGTTGGATGGGATAGTTCAACCATTGCAGGGGGAATGAGCTACATAAAAAAAGAGTTCAAGCTGGAGACTGACCCCACACTAGAGGGACTAATCATGTCCACATCATTTCTCACTGGCACTGTTGTTACAATATTCTCTGGGACAGTTTCTGACATGCTTGGAAGGCGTCCTATGCTGATAGCAGCATCGACCATGTTTTTCTTGAGCGGATTGGTGATGCTATGGGCTCCCAATGTTACTGTGGTTCTGTTGTCGAGACTATTGAATGGAATAGCCCTTGCACTGGCCATAACACTCACTCCTCTCTACATATCAGAGATAGCACCACCTGACATCAGAGGCACTCTCAATACTCTCCCACAGTTTTCTTGCTCTGGGGGAATGTTTCTGGCGTACATCATGGTCTTCTCATTGTCCTTGGTGGATTCTCCAAGTTGGAGAGCAATGCTAGCCGTTGTGTCTATTCCTTCTGTTGCTTACTTTTTTCTAGCTGTGTTTTATCTCCCTGAATCTCCTCCTTGGCTTGTGAGTAAAGGGAGAGTCACTGAGGCTAAGAAAGTTCTGCAAAGACTTCGCGACACTGAAGATGTTTCAGGAGAACTGGCTTTGCTGGCTGAGGGAATGAGTCCAGCGGGTGAAAGCACCACTGTAGAAGAGTACATAGTTACCCCAGCCGGTGACCTCATGGCCAACAAGGAAGCAGGGAGAGATTGCATAAAGCTCTATGGACCTAACCAAGCAGGAGTTTCAATGGTTGCCCAACAAGTGAGTGGACAAGGTAGCATGGTATTCCGGAGCACTTTAGCCTTGCCTCGCCAGGGAAGCATTGTTGCTCAGGCTGCAAATCTCAAAGACCCTCTAGTCAATCTCTTTGGGAGCGTCCATGATATCAATCCCCCGCCCCTTGATTCTGGTGGTTCAAGAGCCATGCTAATGGGAGACACATATAGCACTGACAATTTGCATGCTCCATTACTTTCATCCCAAAGCAGTGCTATGGAGAGGGACAAGGCTTTTGGATTCAAGGATGCATTAGGGACAGGGAATAATGATGGCAACCAAGTACCTAAGAACACTGACATTGGTGGAGGTTGGAAATTGGTTTATAAATCTGCCGAGAGTGGAAGTAAGGAAAAGGGGCTCCAAAGGGTTTATCTGCGTGCAGATCCTAATGCTGTATCGTCTCAACAAGATTCATTTGCTGAGGGCTATGACTTGAATGCAGATAGCAGTGAGGCTTTTCAGGCATCTGCACTTGTCAGCCAGTCAGTTCTATGCCCTAAGAATATGAACATGAAACCAGAAAATGCTGCCAAACGTACAGGTTTTGGTGGTTTGTCAGATATAGGAGTTAGGCGTGCATTAGTTGTTGGAGTTGGACTACAACTTCTTCAGCAGGCTGCTGGCATAAATGGATTTCTATACTATGCTCCCCAGATTCTTGATCAGGCTGGTGTTGGAGCACTTCTGTCAAATTTCGGTATTAGTTCAACATCTGCTTCATTACTCGTAAATATCATTACAACATTCGCAATGCTTCCTTGTATTGCCACTTCCATGAGGCTCATGGATGTTGCTGGCAGGAGGTCAATAATGTTATACACAATACCCATTCTTATAGCGTCTCTCATGGTACTAATGCTCCGGGACTTATTTCACATGAGTGCTACCCTCAATGCAATAGTAACTGCAGTGAGTGTGTTGGTATACGAAAGCTGCTTCGTCATGGGATTGGGTGCGATTCCCAACATCTTGTGTTCAGAAATCTTCCCAACAAGTGTTCGTGGAATATGCATTTCTATTTGCTCTCTTACGTTCTGGATCAGCATCTTAATAGTGACTTCTTCGTTTCCCTTCTTGCTCAAACTCCTTGGGATTAGCGGAGTCATTGGATTGTTCGTAATTGGGTGCATCTCTGCATGGATATTTGTCTACTTGAAAGTTCCTGAAACAAAGGGCATGCCTTTAGAAGTCATCATTGATTTCTTTGCTATTGGTGCAAAACCTGAATGA | 2064 | 0.452 | MREVVIVAIAATVGNVLVGWDSSTIAGGMSYIKKEFKLETDPTLEGLIMSTSFLTGTVVTIFSGTVSDMLGRRPMLIAASTMFFLSGLVMLWAPNVTVVLLSRLLNGIALALAITLTPLYISEIAPPDIRGTLNTLPQFSCSGGMFLAYIMVFSLSLVDSPSWRAMLAVVSIPSVAYFFLAVFYLPESPPWLVSKGRVTEAKKVLQRLRDTEDVSGELALLAEGMSPAGESTTVEEYIVTPAGDLMANKEAGRDCIKLYGPNQAGVSMVAQQVSGQGSMVFRSTLALPRQGSIVAQAANLKDPLVNLFGSVHDINPPPLDSGGSRAMLMGDTYSTDNLHAPLLSSQSSAMERDKAFGFKDALGTGNNDGNQVPKNTDIGGGWKLVYKSAESGSKEKGLQRVYLRADPNAVSSQQDSFAEGYDLNADSSEAFQASALVSQSVLCPKNMNMKPENAAKRTGFGGLSDIGVRRALVVGVGLQLLQQAAGINGFLYYAPQILDQAGVGALLSNFGISSTSASLLVNIITTFAMLPCIATSMRLMDVAGRRSIMLYTIPILIASLMVLMLRDLFHMSATLNAIVTAVSVLVYESCFVMGLGAIPNILCSEIFPTSVRGICISICSLTFWISILIVTSSFPFLLKLLGISGVIGLFVIGCISAWIFVYLKVPETKGMPLEVIIDFFAIGAKPE | 687 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco8g00313 | 687 | ProSitePatterns | Sugar transport proteins signature 1. | 536 | 552 | IPR005829 | GO:0016020|GO:0022857|GO:0055085 | |
| Phco8g00313 | 687 | ProSitePatterns | Sugar transport proteins signature 1. | 63 | 80 | IPR005829 | GO:0016020|GO:0022857|GO:0055085 | |
| Phco8g00313 | 687 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 7 | 669 | IPR020846 | GO:0022857 | |
| Phco8g00313 | 687 | FunFam | Monosaccharide-sensing protein 3 | 2 | 249 | - | - | |
| Phco8g00313 | 687 | SUPERFAMILY | MFS general substrate transporter | 9 | 674 | IPR036259 | - | |
| Phco8g00313 | 687 | Pfam | Sugar (and other) transporter | 463 | 676 | IPR005828 | GO:0016020|GO:0022857|GO:0055085 | |
| Phco8g00313 | 687 | Pfam | Sugar (and other) transporter | 7 | 223 | IPR005828 | GO:0016020|GO:0022857|GO:0055085 | |
| Phco8g00313 | 687 | PANTHER | PROTON MYO-INOSITOL COTRANSPORTER | 4 | 681 | - | - | |
| Phco8g00313 | 687 | PRINTS | Sugar transporter signature | 100 | 119 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Phco8g00313 | 687 | PRINTS | Sugar transporter signature | 15 | 25 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Phco8g00313 | 687 | PRINTS | Sugar transporter signature | 604 | 616 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Phco8g00313 | 687 | PRINTS | Sugar transporter signature | 482 | 492 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Phco8g00313 | 687 | PRINTS | Sugar transporter signature | 581 | 602 | IPR003663 | GO:0016020|GO:0022857|GO:0055085 | |
| Phco8g00313 | 687 | Gene3D | MFS general substrate transporter like domains | 451 | 685 | IPR036259 | - | |
| Phco8g00313 | 687 | Gene3D | MFS general substrate transporter like domains | 2 | 310 | IPR036259 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco8g00313 | Phco-Chr8 | 2887582 | 2890943 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco8g00313 | 8 | 2887582 | 2890943 | Phco8g00313 | 8 | 2887582 | 2890943 | ECH | |
| Phco8g00313 | 8 | 2887582 | 2890943 | Phco4g00747 | 4 | 5753033 | 5756712 | ECH | |
| Phco4g00747 | 4 | 5753033 | 5756712 | Phco8g00313 | 8 | 2887582 | 2890943 | PCT |