Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00015 ATGAGTGGAGCTATTCTTGTTGCTGTTGCTGCTGCCATCGGTAACTTGCTGCAAGGATGGGATAATGCGACTATTGCTGGATCCATCTTGTACATAAAAAGGGAATTTCTATTAGAAAGTCAACCCACAGTTGAAGGTCTAATTGTGGCCATGTCACTTATTGGTGCCACAGTTGTTACTACATGCTCTGGCGCCCTTTCAGACTTGCTTGGCCGACGTCCTATGTTGATTATTTCATCTCTCCTTTATTTTGTTAGTTCTCTTGTGATGCTATGGTCTCCGAATGTTTATATCCTCCTCTTTGCAAGGCTTTTAGATGGTTTGGGAATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGACAGCTCCTCCTGAGATTAGGGGATTACTCAATACACTTCCACAGTTTACTGGTTCCGCGGGAATGTTTTTCTCCTATTGTATGGTGTTTGGGATGTCACTGACCAAGGCGCCAAGCTGGAGACTCATGTTGGGTGTTCTTTCAATCCCTTCTCTTATTTACTTTGCACTCACACTGTTCTTCTTGCCCGAATCTCCGAGATGGCTTGTTAGTAAAGGCCGAATGCTTGAGGCCAAGAAGGTTTTGCAGCGCCTTCGTGGAAGGGAAGATGTTTCCGGTGAAATGGCTTTACTGGTTGAGGGGCTTGGAGTTGGAGGTGATACAGCCATAGAAGAGTATATAATTAGTCCAGCCAATGAACTTGGTGATGAAGAGGATCCATACAGAGAAAAAGATCAGATTAAGTTGTATGGACCGGAACAAGGTCAGTCCTGGGTTGCTAGACCTGCTGCTGGAGCAAGTTCAACCGGCCTTGTATCTCAGAAAGGAAGCATGGCAAATCAAACTGGTCTAGTGGACCCTCTAGTGACCCTCTTTGGTAGTGTTCATGAGAAGCTCCCGGAAACAGGAAGCATGCGAAGCACTCTTTTTCCACACTTTGGGAGTATGTTTAGTGTTGGGGGAAATCAGCCTAGGAATGAAGATTGGGATGAAGAAAGCCTTGCCAGAGAGGGTGATGATTATGTCTCTGATGCTGCTGCTGGTGATTCTGATGACAATTTGCACAGTCCATTGATCTCACGTCAAACAACGAGTCTGGATAAGGACATTCCTCCAACTGCTCATAGCAACCTTTCAAGCACGAGGCAAGGTAGTCTTTTGCATGGAAATGCAGGAGAACCCACTGGTAGTACCAGGATTGGTAGTGGTTGGCAGCTAGCATGGAAATGGTCTGAAAGAGAGGACCCAAATGGAAACAAGGAAAGCGGCTTTAAGAGAATATATTTACACCAAGAAGTTGGTCCTGTATTACGTGGTTCTGTGGTTTCACTCCCTGGTGGTGATTTACCGAATGATGGTGAGACTGTCCAGGCCGCTGCTTTGGTGAGTCAGCCAGCCCTTTATAACAAGGATGTTATGCGTCAACGACCTGTTGGACCAGCTATGATTCATCCATCTGAAACAACTGCAAAAGGGCCAAACTGGAGTGACCTTTTTGAACCTGGGGTGAAGCATGCCTTGATTGTGGGGGTGGGACTTCAAATTCTTCAGCAGTTCTCTGGTATAAATGGGGTTCTCTACTACACACCTCAAATTCTTGAACAGGCAGGTGTTGGTTATCTTCTTTCAAACTTAGGCCTTGGTTCTACTTCGTCATCCTTTCTTATTAGTGCAGTGACAACCTTGTTGATGCTGCCTTGTATAGCCGTTGCCATGAGGCTCATGGATATATCTGGCAGAAGGACTTTGCTACTTAGTACAATTCCCGTCCTAATAGCATCTCTTCTCATATTAGTCCTGGGGAGTCTTGTGGATTTGGGCAGCACTGCAAATGCATCAATCTCAACCATTAGTGTCATTGTATATTTCTGTTTCTTTGTCATGGGATTTGGGCCAATTCCTAATATACTTTGTGCAGAGATCTTCCCCACTCGAGTTCGTGGTCTCTGCATTGCCATTTGTGCTCTTACCTTTTGGATCTGTGATATCATTGTCACCTACACACTCCCAGTTATGCTCAATTCTATAGGCCTCGCTGGTGTTTTTGGTATTTATGCTGTCGTGTGCTTCATAGCATGGGTCTTTGTCTTTTTGAAAGTTCCAGAAACCAAGGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTCGGAGCAAAACAAGTTGACGATGCCAAAGTACAACTGACCTAA 2223 0.4507 MSGAILVAVAAAIGNLLQGWDNATIAGSILYIKREFLLESQPTVEGLIVAMSLIGATVVTTCSGALSDLLGRRPMLIISSLLYFVSSLVMLWSPNVYILLFARLLDGLGIGLAVTLVPLYISETAPPEIRGLLNTLPQFTGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGVGGDTAIEEYIISPANELGDEEDPYREKDQIKLYGPEQGQSWVARPAAGASSTGLVSQKGSMANQTGLVDPLVTLFGSVHEKLPETGSMRSTLFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYVSDAAAGDSDDNLHSPLISRQTTSLDKDIPPTAHSNLSSTRQGSLLHGNAGEPTGSTRIGSGWQLAWKWSEREDPNGNKESGFKRIYLHQEVGPVLRGSVVSLPGGDLPNDGETVQAAALVSQPALYNKDVMRQRPVGPAMIHPSETTAKGPNWSDLFEPGVKHALIVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLGSTSSSFLISAVTTLLMLPCIAVAMRLMDISGRRTLLLSTIPVLIASLLILVLGSLVDLGSTANASISTISVIVYFCFFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYTLPVMLNSIGLAGVFGIYAVVCFIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQVDDAKVQLT 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00015 740 MobiDBLite consensus disorder prediction 372 410 - -
Phco7g00015 740 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco7g00015 740 SUPERFAMILY MFS general substrate transporter 5 719 IPR036259 -
Phco7g00015 740 Gene3D MFS general substrate transporter like domains 2 249 IPR036259 -
Phco7g00015 740 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 5 730 - -
Phco7g00015 740 FunFam monosaccharide-sensing protein 2 2 249 - -
Phco7g00015 740 Gene3D MFS general substrate transporter like domains 497 736 IPR036259 -
Phco7g00015 740 Pfam Sugar (and other) transporter 7 221 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco7g00015 740 Pfam Sugar (and other) transporter 502 722 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco7g00015 740 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 714 IPR020846 GO:0022857
Phco7g00015 740 FunFam Monosaccharide-sensing protein 2 478 727 - -
Phco7g00015 740 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco7g00015 740 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00015 740 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00015 740 PRINTS Sugar transporter signature 527 537 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00015 740 PRINTS Sugar transporter signature 649 661 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00015 740 PRINTS Sugar transporter signature 626 647 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00015 Phco-Chr7 97120 102212 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00015 7 97120 102212 Phco7g00015 7 97120 102212 ECH
Phco7g00015 7 97120 102212 Phco4g00747 4 5753033 5756712 ECH