Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00739 ATGTCGAAGCAGACATACAGCGTGTGCTTCTGCTGGCGCCGGCGGTTCAAGCTGGCCCTGGCGGAGGCGCCGTCGGAGATCAGGACCCTCTTCGAGGAGTACTCTGAGAATGAGATCATGACACCTTCGCATCTGAAAAGGTACCTTGTTGAAGTGCAAAAGCAAGAGAAGGCCACTGAAGAAGAGGCGCAAACCATCATCGACAGCTTCAGGCATTTCCACCGCAGAAGCGTTGGCCTCAATCTCGAATCTTTCTTCAAGTACCTCTTCAGTGATGACAACCCCCCCCTTATTCCTTCTCGTGGGGTGCACCATGATATGACTTTACCCTTGTCACATTATTTCATATATACTGGTCATAATTCGTATTTAACTGGGAATCAGCTGAGCAGCGACTGCAGTGACGTGCCCATTATAAATGCACTAAAGAGAGGGGTGAGGGTGATTGAATTGGACATATGGCCTAATGCAACAAAGGATAATATAGATGTTCTTCATGGAAGGACATTGACTGCTCCTGTGGAGCTCATCAGATGTTTGAGATCTATTAAGGAACATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACACCGGATCTTCAGGCTAAAGTGGCTGAGATGGTCACAAACACTTTTGGAGACATACTATTTACTCCTAACACCGAAAGTGTGAAGGAGTTCCCTTCTCCTGAATCTCTTAAAAGGAGGATTATTATATCAACAAAACCACCTAAGGAGTATCTTGAAGCAAAAGAGAAGGATAAAGGGGATGATTCACAGCACGAAAAGGAAAAGGGGGATGTTTCACTAAGCCGAAAGGCATCAAATGAGGATGAAGCTTGGGGAAAGGAAGTCCCTAGCTTGAAAGGTGGTACGATAGAGGATTACAAGGACAACAACGAGGATGAAGATCTTAATGATGAGGAAGAATTTGATGAATTAGATAAGTTACCTAATAATAATGAAGCTCCAGAATATAGACGCCTAATTGCCATTCATGCTGGGAAGCCTAAAGGTGGATTAGAGGAATGCCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCTATAAATCATGGAAAACAAATTGTAAGATTTACTCAGCGCAATATTTTGAGGGTGTATCCCAAGGGTACTCGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAAATGGTTGCATTTAACATGCAGGGGTATGGTAGATCTCTTTGGTTGATGCAAGGGATGTTCAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGAGTTTCTGTTAGAGACTGGTCCAGACAATGAGGTCTTCGACCCTAAAGCCAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATACATGGGGGAAGGATGGTATTATGATTTCAAGCATACACACTTTGATCAATACTCACCTCCAGACTTCTATACAAGAGTGGGGATTGCTGGAGTCCCTCATGATACTGTAATGAAGAAAACTAGGGCAATAGAGGATAATTGGTTACCTACATGGAATGAGACATTTGAGTTCCCTCTTACTGTTCCAGAGTTGGCCTTGCTTCGCATAGAAGTTCACGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGCCTACCTATCCGGGAGCTAAGAAGTGGCATTCGAGCAATTCCACTGCATAGCCAAAAGGGAGAGAAATACGCCTCTGTAAAGCTTCTCATGCGTTTTGAGTTTATTGATTGA 1800 0.4356 MSKQTYSVCFCWRRRFKLALAEAPSEIRTLFEEYSENEIMTPSHLKRYLVEVQKQEKATEEEAQTIIDSFRHFHRRSVGLNLESFFKYLFSDDNPPLIPSRGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNATKDNIDVLHGRTLTAPVELIRCLRSIKEHAFVASEYPVVITLEDHLTPDLQAKVAEMVTNTFGDILFTPNTESVKEFPSPESLKRRIIISTKPPKEYLEAKEKDKGDDSQHEKEKGDVSLSRKASNEDEAWGKEVPSLKGGTIEDYKDNNEDEDLNDEEEFDELDKLPNNNEAPEYRRLIAIHAGKPKGGLEECLKVDPDKVRRLSLSEQQLEKAAINHGKQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYVKKPEFLLETGPDNEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPHDTVMKKTRAIEDNWLPTWNETFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPIRELRSGIRAIPLHSQKGEKYASVKLLMRFEFID 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00739 599 SMART C2_3c 470 578 IPR000008 -
Phco3g00739 599 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 598 IPR035892 -
Phco3g00739 599 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 463 IPR017946 GO:0006629|GO:0008081
Phco3g00739 599 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 362 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco3g00739 599 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 11 597 IPR001192 GO:0035556
Phco3g00739 599 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Phco3g00739 599 PRINTS Phospholipase C signature 564 574 IPR001192 GO:0035556
Phco3g00739 599 PRINTS Phospholipase C signature 388 409 IPR001192 GO:0035556
Phco3g00739 599 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Phco3g00739 599 PRINTS Phospholipase C signature 409 427 IPR001192 GO:0035556
Phco3g00739 599 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Phco3g00739 599 Pfam Phosphoinositide-specific phospholipase C, efhand-like 25 93 IPR015359 -
Phco3g00739 599 FunFam Phosphoinositide phospholipase C 21 100 - -
Phco3g00739 599 FunFam Phosphoinositide phospholipase C 465 598 - -
Phco3g00739 599 Gene3D C2 domain 465 599 IPR035892 -
Phco3g00739 599 MobiDBLite consensus disorder prediction 252 303 - -
Phco3g00739 599 MobiDBLite consensus disorder prediction 252 313 - -
Phco3g00739 599 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Phco3g00739 599 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 363 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco3g00739 599 SMART plcx_3 105 249 IPR000909 -
Phco3g00739 599 Gene3D - 21 100 - -
Phco3g00739 599 Pfam C2 domain 471 572 IPR000008 -
Phco3g00739 599 SMART plcy_3 333 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco3g00739 599 CDD C2_PLC_like 468 597 - -
Phco3g00739 599 SUPERFAMILY EF-hand 16 106 IPR011992 -
Phco3g00739 599 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Phco3g00739 599 ProSiteProfiles C2 domain profile. 451 580 IPR000008 -
Phco3g00739 599 SUPERFAMILY PLC-like phosphodiesterases 105 451 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00739 Phco-Chr3 6052676 6057503 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02775 2 57204995 57209292 Phco3g00739 3 6052676 6057503 ECH
Phco3g00332 3 2339141 2349056 Phco3g00739 3 6052676 6057503 ECH
Phco3g00739 3 6052676 6057503 Phco3g00739 3 6052676 6057503 ECH
Phco2g02775 2 57204995 57209292 Phco3g00739 3 6052676 6057503 PCT