Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00289 ATGATTTCCACGGTGATACAGCCCGCCATATCGATCGGGGCCTCTGATGTTTTGCTACGGCAAAAGGGTCCTGCTTTAACCTCAGGGCACTCATGTTCCCTTGTTGTCCCTTCTTCCCACCCAAGGAAGAAGACTCTGAGATCTCTGTTGTCAGTGCAAAAGCCACTTCACCTTTCATGTGTTGGTTTGGGGAATTTTGTTGGGTCTCCGGTGAGGCGTGAACGTGGTGATCTGGGGACATGTAGGGCGTATGAGGCTGAGAGGCCAGAGGTGGAAGGGGCTGGGGATCCATCAGAGGCTGCTAAGAAGGTGAAAATTGGTATATACTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTGCTGAATGCGTACCCCTACCCTTGGCTTACCTCAACTCTCTCCCTTGCATGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACCAGGATAGCTGAGCCTCCGAAGACTGATATTGAGTTCTGGAAGACTTTGTTCCCAGTTGCTGTTGCACATACAATAGGACATGTAGCGGCAACTGTTAGCATGTCAAAAGTTGCAGTATCATTCACCCATATCATAAAGAGTGGTGAACCTGCTTTCAGTGTTCTTGTTTCCAGATTTCTTCTGGGTGAGACCTTCCCGGTGCCAGTCTATCTGTCTTTAGTTCCAATCATTGGTGGATGTGCACTTGCTGCTGTTACTGAGCTCAACTTCAACATGATTGGTTTTATGGGAGCTATGATATCGAATTTGGCATTCGTGTTCCGTAATATCTTTTCAAAGAAGGGCATGAAGGGAAAGGCTGTTAGTGGAATGAATTACTATGCATGTTTATCTATACTGTCTCTTGTAATTCTCACACCTTTTGCAATTGCTGTGGAGGGACCACAGATGTGGGCAGCTGGATGGCAAACAGCACTCTCTCAAATTGGACCTCAATTTATATGGTGGGTGGCAGCTCAGAGTATATTTTATCACCTGTATAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCTTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTTATAGTTTCTTCAATTATCATCTTCCACACACCAGTTCAGCCTGTTAACGCTCTTGGAGCTGCTATTGCCATCCTCGGAACCTTCTTGTATTCACAGGCAAAGCAGTAG 1194 0.4573 MISTVIQPAISIGASDVLLRQKGPALTSGHSCSLVVPSSHPRKKTLRSLLSVQKPLHLSCVGLGNFVGSPVRRERGDLGTCRAYEAERPEVEGAGDPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPKTDIEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKAVSGMNYYACLSILSLVILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00289 397 Pfam Triose-phosphate Transporter family 105 393 IPR004853 -
Phco3g00289 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 240 - -
Phco3g00289 397 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 105 396 IPR004696 GO:0016020|GO:0022857|GO:0055085
Phco3g00289 397 PANTHER SOLUTE CARRIER FAMILY 35 105 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00289 Phco-Chr3 2066764 2070474 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00787 11 5702340 5704428 Phco3g00289 3 2066764 2070474 ECH
Phco3g00289 3 2066764 2070474 Phco3g00289 3 2066764 2070474 ECH
Phco11g02084 11 17266617 17270198 Phco3g00289 3 2066764 2070474 PCT