Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02084 ATGATTTCTTCCTTGAGACAGCCTGTTGTGGGGATCAGTGGTTCTGATCTTCTTTTGAGGCAAAGACATGCAACCCCAGTTAAGGCAGGGTCGTTTTTGCCTTCTTTGTCAAGAGAAAAGGGGCAAGGATCTCTGGTTTCAGTGCACAAGCCACTGCACATTGCTTCTTCTCTTGGTGGTCGAAATTCTGTGTCAGGGAAGAGTGATGCAAGGGGTGATTTGGTGAAGTGTGAGGCCTATGAGGCAGACAGATCAGAGGTTGAGGCTACAAACACACCATCAGAGGCTGCAAAGAAGGTGAAAATTGGCATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTTAATATTTATAACAAGAAGGTGTTGAATGCCTACCCCTACCCCTGGCTGACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACTGGGATTGCAGAAGCCCCCAAGACTGATCCTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCCGTTGCACATACAATAGGACATGTAGCGGCAACTGTTAGTATGTCAAAAGTTGCGGTATCATTTACGCACATAATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCAAGATTTCTCTTGGGTGATACCTTCCCTGTGCCAGTCTATCTGTCTTTAGTTCCGATCATTGGTGGATGTGCACTTGCAGCCGTGACTGAACTCAATTTCAACATGATTGGTTTTATGGGGGCTATGATATCGAATTTGGCATTTGTATTCCGTAACATCTTTTCGAAAAAGGGCATGAAGGGAAAGTCTGTCAGTGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTAGCAATTCTCACACCCTTTGCAATTGCCGTGGAAGGACCACAGATGTGGATTGCCGGATGGCAAACAGCCGTCTCTCAGATTGGAAACCAACTCATATGGTGGGTAGCAGCTCAAAGTGTATTCTATCATTTATACAATCAAGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACGTTTAGCGTTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCAATTATTATCTTCCGCACACCAGTTCAACCTGTCAATGCTCTTGGTGCTGCCATTGCCATCCTCGGAACCTTCTTATATTCACAGGCAAAACAATAG 1182 0.445 MISSLRQPVVGISGSDLLLRQRHATPVKAGSFLPSLSREKGQGSLVSVHKPLHIASSLGGRNSVSGKSDARGDLVKCEAYEADRSEVEATNTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAEAPKTDPEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGDTFPVPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWIAGWQTAVSQIGNQLIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQAKQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02084 393 Pfam Triose-phosphate Transporter family 101 389 IPR004853 -
Phco11g02084 393 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
Phco11g02084 393 PANTHER SOLUTE CARRIER FAMILY 35 101 392 - -
Phco11g02084 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02084 Phco-Chr11 17266617 17270198 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02084 11 17266617 17270198 Phco3g00289 3 2066764 2070474 PCT