Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00787 ATGATCTCTTTAACGAAATGCTCAGCATCATCGCTCACTTGTTCTGCTTTCTCAACCAGAAAACTTTCCCCTGCAAGGCCTCAACTTCTCACATTTCCAACCATTAATAACGTTGAACAAAACACAAGTCCCTCTCAGTTGTGCTCCCAGAAACCGCTCTACCTTTCATCCACAGAGAACTTGGCATTGGTGAAGAGAAAGAGGGTGACGGAGTGCCAGGCCTATGAGGCTGACAGGTCACGCCCCATAGAGATTAACATTGAGCTGCCAGGTGAAGATGCTGCTCAGAGGGTGAAGATCGGGGTGTATTTTGCCACCTGGTGGGCTTTGAATGTGGTGTTCAACATCTATAACAAGAAGGTTTTGAATGCTTTTCCTTACCCCTGGCTCACCTCCACCCTGTCCCTTGCTGCTGGCTCCATCATGATGTTAATCTCCTGGGCCACCAGAGTTGCTGAAGTCCCAAAAGTTAACTTCGACTTCTGGAAGGCCTTGTTTCCTGTTGCAGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAGGTTGCTGTCTCTTTCACTCACATCATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTGTCAAGGTTCTTGCTTGGAGAAGCATTCCCAATGCCGGTTTATCTTTCACTGTTGCCAATTATTGGTGGTAGTGCACTAGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGCTTCATGGGGGCTATGATATCAAATTTGGCATTTGTCTTCAGGAATATATTCTCAAAGAAAGGAATGAAGGGGATGTCTGTTAGTGGAATGAACTACTATGCCTGTCTTTCCATAATGTCTCTGTTGATCCTCACACCTTTTGCCATTGCTGTGGAGGGCCCCAAGGTTTGGGCTGCAGGCTGGCAATCAGCTGTGTCTCAGATTGGTCCCAATTTTGTATGGTGGGTAGCTGCTCAGAGTGTCTTCTACCACTTGTACAATCAAGTCTCTTACATGTCTCTGGATCAGATTTCTCCCTTAACATTCAGCATCGGAAACACAATGAAGAGGATTTCGGTCATTGTCTCTTCTATTCTTATCTTTCACACGCCTGTTCAGCCCATCAATGCTCTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCTAAACAGTGA 1176 0.4651 MISLTKCSASSLTCSAFSTRKLSPARPQLLTFPTINNVEQNTSPSQLCSQKPLYLSSTENLALVKRKRVTECQAYEADRSRPIEINIELPGEDAAQRVKIGVYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSIMMLISWATRVAEVPKVNFDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMPVYLSLLPIIGGSALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSIMSLLILTPFAIAVEGPKVWAAGWQSAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQAKQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00787 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 234 - -
Phco11g00787 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 388 - -
Phco11g00787 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
Phco11g00787 391 PANTHER SOLUTE CARRIER FAMILY 35 99 390 - -
Phco11g00787 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00787 Phco-Chr11 5702340 5704428 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00787 11 5702340 5704428 Phco3g00289 3 2066764 2070474 ECH
Phco11g00787 11 5702340 5704428 Phco11g00787 11 5702340 5704428 ECH
Phco8g02577 8 36887387 36889890 Phco11g00787 11 5702340 5704428 PCT