Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02651 ATGCCTTTGAAATTGGAAGAGAACTATAAGAATCGTTTGCAAACATTCAGTCAGAGGTCAAATAAACAATTTCCCATGTATGTGACTGTGAATGAGTGGGCTCAGCATGATCCGAGGTATAGGTCAACAGTGTCAGTGGACGGAATGAACTACACTTCCCCCAACCTTTTCTCTCAACGAAAGCCTGCTGAGCAGGATGCGGCTAGAATTGCACTCTTAAGCCTATCAGAACAGCGTAAAGATGATGAGCCCCCTGTTGTCCATGAGAATATCACATTTTCCAAATCTATCTTGCATGAGTATGCTGCTAAGCTGAATGTGGAAAAGCCTAAATACAACATTGTTCAACAAGAAGGACCACATCCTCTTTTTGTATCATCTGTGAGGTTTAATGGTACACAATACACTGGCGCTACTGCCAAAAACAAAAAAATTGCTGAGCAGTTGGCAGCACATCATGCTATAGCGACAATGTTAGATGGTTCTACCTCAGGATTACTTTACGAGACAATAAAGGCAAAATACAGACTTCCTGGTGCAGTCAGACCAACTGAACCCCTTGGAATTGGTGCAATCAATTCCATTTCAGCCGCCATGACAAATAGAGAAAATACCTATGTTTCACTGAGTCATAAGAATAAGGAGGCTGCAGTTCTTGTAGCTGCTCATGTTCCATCCCAGCTGCCTAAAAATATGCCACCCGTTCAAACCACTGTCGTTGAGATTCCACAACTGAATCTCCTTCCAAGTCAAGAACAGTCTACTGCTACTTCTGGATCAGGTGAACTATCTATTGGTGATGGTGGTTCAGGAATTTGCAGATTGAGAATTGAGGCATTTTCTTTTAGCACAGGCTGA 858 0.4242 MPLKLEENYKNRLQTFSQRSNKQFPMYVTVNEWAQHDPRYRSTVSVDGMNYTSPNLFSQRKPAEQDAARIALLSLSEQRKDDEPPVVHENITFSKSILHEYAAKLNVEKPKYNIVQQEGPHPLFVSSVRFNGTQYTGATAKNKKIAEQLAAHHAIATMLDGSTSGLLYETIKAKYRLPGAVRPTEPLGIGAINSISAAMTNRENTYVSLSHKNKEAAVLVAAHVPSQLPKNMPPVQTTVVEIPQLNLLPSQEQSTATSGSGELSIGDGGSGICRLRIEAFSFSTG 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02651 285 CDD DSRM_SF 99 155 - -
Phco2g02651 285 PANTHER RIBONUCLEASE III 10 177 IPR011907 GO:0003723|GO:0004525|GO:0006364
Phco2g02651 285 SUPERFAMILY dsRNA-binding domain-like 94 164 - -
Phco2g02651 285 Pfam Double-stranded RNA binding motif 9 75 IPR014720 -
Phco2g02651 285 Pfam Double-stranded RNA binding motif 94 156 IPR014720 -
Phco2g02651 285 SUPERFAMILY dsRNA-binding domain-like 7 75 - -
Phco2g02651 285 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 93 160 IPR014720 -
Phco2g02651 285 Gene3D - 2 82 - -
Phco2g02651 285 Gene3D - 84 162 - -
Phco2g02651 285 SMART DRBM_3 9 76 IPR014720 -
Phco2g02651 285 SMART DRBM_3 94 159 IPR014720 -
Phco2g02651 285 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 8 77 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02651 Phco-Chr2 56184937 56186708 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02651 2 56184937 56186708 Phco2g02651 2 56184937 56186708 ECH
Phco2g02651 2 56184937 56186708 Phco3g00601 3 4846804 4850144 PCT
Phco3g00602 3 4852887 4855565 Phco2g02651 2 56184937 56186708 PCT