Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00601 ATGGCTTCTGCTCCTCCTTCTCTACCTGCGGTTCCGGTTCCTGTTCCCGTTCCTGTTCCCGTTCCCGTTGCTTCTCAGTCTCCTGGACCTTTGATGTATAAAAATCGTTTGCAAGAGTTTGCAACAAGGTCAGGCATTGCTATTCCTGTGTATCGAACTGTTAACGAGGGAGAACCACATAATCCAAAATTTAGGTCAACTGTGTGGGTGGCTGGGATTAGTTATACTTCCCAATCCACATTTACTCAGAAAAAAGCTGCTGAACAGGAAGCTTCTAGACTTGCTCTAGAAATTACCCTTCAGAAGACCAGAGATGAAGGACCCTCTCTTGTCAGTCAGATTTCTCCATTTTGCAAGTCTATCATAAATGAATATGCTTCTAAACTGCATATTGAAGGACCTTCATACAACACTGTTCAGCAACAACAAGGAGGTGTGATTCCGGTTTTTACAACATCTTTAGTTTTCAATGGTACAAGCTACACCGGTGATCCAGCCAGAACCAAAAAGGAAGCTGAGCAGTCGGCAGCACACGCTGCTATTCTTTCAATTATGGGTGATTCTAGCTCAGGAATTAAGCTCTGTGAGATAATTAAGTCGAAGTCTTTATTTTATGATGCAATCAAAGGAAAGGGCGAATCTCTGTTACAGGCTAATGCAGTGTTATCCACACCAAATTCAGAACATATCTCTCCTACACTGGATCGTAAAGATGCAGCAGTTCCAGCTTCTGTGGCTGATAATAGTGAAGTTAAAGTTGATTATCCTGAGTCTTCTGAAATTCAATCTACATGTCAAACATTTCAAATTCCAAAACAAGAATCTTCCCTTCAAGCCACCCTGCCTCTGCAACCCGGTTCAGCACATTCAATTGATGATGATTTAAGTTCAAAAAGGCGGAGAAAGAACAGGAAGAGGGCTAATAAGAAGTCACGGTTGGAATCGCCGTTACCGACAGTTCCCATGAACCAAGTCCCTCCATGCACTGCAGATCCCATGAATCAAGCCCCTCCTTGTTCGGTGGCACAGTAA 1032 0.4322 MASAPPSLPAVPVPVPVPVPVPVASQSPGPLMYKNRLQEFATRSGIAIPVYRTVNEGEPHNPKFRSTVWVAGISYTSQSTFTQKKAAEQEASRLALEITLQKTRDEGPSLVSQISPFCKSIINEYASKLHIEGPSYNTVQQQQGGVIPVFTTSLVFNGTSYTGDPARTKKEAEQSAAHAAILSIMGDSSSGIKLCEIIKSKSLFYDAIKGKGESLLQANAVLSTPNSEHISPTLDRKDAAVPASVADNSEVKVDYPESSEIQSTCQTFQIPKQESSLQATLPLQPGSAHSIDDDLSSKRRRKNRKRANKKSRLESPLPTVPMNQVPPCTADPMNQAPPCSVAQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00601 343 Gene3D - 115 185 - -
Phco3g00601 343 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 117 186 IPR014720 -
Phco3g00601 343 SUPERFAMILY dsRNA-binding domain-like 118 189 - -
Phco3g00601 343 Gene3D - 31 98 - -
Phco3g00601 343 FunFam Double-stranded RNA-binding protein 4 113 190 - -
Phco3g00601 343 PANTHER - 32 338 - -
Phco3g00601 343 Pfam Double-stranded RNA binding motif 33 97 IPR014720 -
Phco3g00601 343 Pfam Double-stranded RNA binding motif 119 181 IPR014720 -
Phco3g00601 343 MobiDBLite consensus disorder prediction 282 343 - -
Phco3g00601 343 SUPERFAMILY dsRNA-binding domain-like 31 99 - -
Phco3g00601 343 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 32 101 IPR014720 -
Phco3g00601 343 SMART DRBM_3 118 185 IPR014720 -
Phco3g00601 343 SMART DRBM_3 33 100 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00601 Phco-Chr3 4846804 4850144 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00601 3 4846804 4850144 Phco3g00601 3 4846804 4850144 ECH
Phco2g02651 2 56184937 56186708 Phco3g00601 3 4846804 4850144 PCT