Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00602 ATGCTGAATTCTTCAACTATCTGTCACTCATCCATGGCTTCATCTTCTTCCCAACCTTTACCTCCTCAACCATCTCCTTTTCCCTTTCCTGTTCAACCTGTTGCTCAACAACTGATGCACAAAAATCGCTTACAAGAGTTTGCTCAAAAGTGTAACATTGCACTTCCCGTGTATCAAACTAACAACGAGGGACAACAACATGCTCCAGGATTTAGGTCAAAGGTGTGGGTGGATGGAATGAGTTACATTTCCCAATCTACTTTTTCCCACAAAAAAACGGCTGAACAGGATGCTGCCAGACTTGCCTTGAAGTGTCTCTCTGAAAGGACAAGAGATGAAGCACCATCTCTTGATTGTGAGATTTCTACATTTTGCAAGTCTATCTTGAATGAATATGCTACTAAATTGAATCTAAAAGGACCTACTTACAAGACTGTTCAGCAAGAAGGGTTGCTTCCTGGTTTTATATCTTCTTTATTTTTCAATGGCACAAGTTACACTGGTGATGGGGCTAGAAACAAAAAGGATGCTGAACAGTTAGCTGCTAGTGCTGCTATTCTCTCAATTCTGGATAATTCTGATTCAGGATCAATGCTCTTTGAGATGATTAAGTCAAAATCTAAACTTAATCATGCAATAAAAAGAAAGAAGGGAGTGCAAAATATTCATCTTAGTGCTGTGACACCCAAATCAAAGACAGGACATACCTATGTTGGATTGGGTGATAAGGAATTTGCAGGTTCAGTGGCTGATAATAATGTTAAAACTGAGGTTGAATTTCTTGAGTCTTCTAAGATGGTTTCCCCAAGTCAAGAATTTAAGATACCAAAGCAAGAACTATTCCCTACGGCCACCAAGGGGTCAAATGTGTACGTACCAGGACGTTCAGCTCCTACTTTTCATGGTGGTTCAAATTTGAAAAGACATAGAAAGAAGTAG 939 0.3951 MLNSSTICHSSMASSSSQPLPPQPSPFPFPVQPVAQQLMHKNRLQEFAQKCNIALPVYQTNNEGQQHAPGFRSKVWVDGMSYISQSTFSHKKTAEQDAARLALKCLSERTRDEAPSLDCEISTFCKSILNEYATKLNLKGPTYKTVQQEGLLPGFISSLFFNGTSYTGDGARNKKDAEQLAASAAILSILDNSDSGSMLFEMIKSKSKLNHAIKRKKGVQNIHLSAVTPKSKTGHTYVGLGDKEFAGSVADNNVKTEVEFLESSKMVSPSQEFKIPKQELFPTATKGSNVYVPGRSAPTFHGGSNLKRHRKK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00602 312 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 124 191 IPR014720 -
Phco3g00602 312 SMART DRBM_3 40 107 IPR014720 -
Phco3g00602 312 SMART DRBM_3 125 190 IPR014720 -
Phco3g00602 312 SUPERFAMILY dsRNA-binding domain-like 125 189 - -
Phco3g00602 312 FunFam Double-stranded RNA-binding protein 4 120 195 - -
Phco3g00602 312 PANTHER RIBONUCLEASE III 39 224 IPR011907 GO:0003723|GO:0004525|GO:0006364
Phco3g00602 312 MobiDBLite consensus disorder prediction 1 29 - -
Phco3g00602 312 MobiDBLite consensus disorder prediction 1 18 - -
Phco3g00602 312 Gene3D - 24 112 - -
Phco3g00602 312 Gene3D - 113 194 - -
Phco3g00602 312 Pfam Double-stranded RNA binding motif 126 186 IPR014720 -
Phco3g00602 312 Pfam Double-stranded RNA binding motif 41 104 IPR014720 -
Phco3g00602 312 SUPERFAMILY dsRNA-binding domain-like 36 106 - -
Phco3g00602 312 MobiDBLite consensus disorder prediction 284 312 - -
Phco3g00602 312 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 39 108 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00602 Phco-Chr3 4852887 4855565 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00602 3 4852887 4855565 Phco2g02651 2 56184937 56186708 PCT