Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02156 ATGTGTGGGAAGGAAGTCCATGCTCAAACTCCAAGGTTGTTCAGTTCTACTATTGTAGTAGTATTTGAGATTGGTGAGGGGAAGCACCACACCTCTGCAACCTCATCATTTCAAGGCCAACAAAGCACAAAAACAAAAAAGAGAAAGCAGAAAAGAAAAAGAGCAACCAGAGAGAAAGAGAGAGAGAGAGAGAGAGGAAAGAAAGGGATAACGAAGAGAAAATTTTCAAGGAAGAAGAAAGGTTTGTGTTTAGAGTTGGACAGGATGCAGAGTGAGCAACAGAGCAACAACAACAACCAGTTGGTAGTGCAGAATTCGGGGAGTCTAAGCTTCAGCAGCCATTTGTCGAAGGAAGATGAAGAGATGTCCAGGTCTGCTCTCTCCACCTTCAGGGCCAAGGAGGAAGAGATTGAAAGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAGCTTCAGTTGGGTCGTGTTGAGGAAGAAACCAAGCGTCTTGCCACCATTCGTGAGGAACTCGAAGCCCTGGCAGATCCAATGAGGAAAGAAGTTGCACTTGTTCGAAAAAGGATCGATTCCGTAAACAAAGAATTAAAGCCACTAGGTCATGCCTGCCAGAAGAAGGAGAAAGAATACAAAGACGCCCTTGAATCTTTTAATGAAAAGAACAGGGAAAAAGTACAGCTAATCACCAAGTTAATGGAGTTGGTGAGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGCAAGAACGTAGATTCGATGCAATGA 768 0.4388 MCGKEVHAQTPRLFSSTIVVVFEIGEGKHHTSATSSFQGQQSTKTKKRKQKRKRATREKERERERGKKGITKRKFSRKKKGLCLELDRMQSEQQSNNNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVALVRKRIDSVNKELKPLGHACQKKEKEYKDALESFNEKNREKVQLITKLMELVSESERLRMKKLEELSKNVDSMQ 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02156 255 Pfam Transcriptional activator 104 253 IPR007033 -
Phco2g02156 255 Coils Coil 127 147 - -
Phco2g02156 255 MobiDBLite consensus disorder prediction 29 77 - -
Phco2g02156 255 PANTHER RAB6-INTERACTING PROTEIN GORAB 92 253 IPR007033 -
Phco2g02156 255 Coils Coil 201 221 - -
Phco2g02156 255 MobiDBLite consensus disorder prediction 29 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02156 Phco-Chr2 52270867 52273350 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02156 2 52270867 52273350 Phco6g02098 6 41417414 41418863 ECH
Phco2g02156 2 52270867 52273350 Phco2g02156 2 52270867 52273350 ECH
Phco2g02156 2 52270867 52273350 Phco9g01003 9 8455378 8462130 ECH