Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02098 ATGGGCTTAGTTTGCAGCAACGGAGAGGAAATGCAGAAAATGAAGAACCTTGGCAGCATTGGAAGCAGTGGGAGGCTATCAGCAGAAGAGTATGAGGATGAGGAGATTTCAAAGCTGGCAATCTCCACATTTCAATCTAAGGAAGAAGAAATTGAGAGGAAGAAAATGGAGGTGAGGGAGAAAGTTGAACTCCAACTTGGTCGTGCCGAAGAAGAGACTAGGCGCTTGACACACATTTGGGAAGAGCTTGAAGTGCTCGACGATCCCATGAGGAAGGAAGTTGCAATGGTACGCAAGAAGATTGACTTGGCTAACAGAGATTTAAAGCCACTGGGACTTAACTACCAGAAAAAGGAGAAAGAGTGTAAAGAAGCCTTGGAAGCTTTCAATGAAAAAAACAAAGAGAAGGCTCATCTAGTAGCTACACTAGTTGAGATGCTGACTGAGAGTGAAAGAATGAGGATGAAGAAACTGGACGAGCTATGCAAGACAATAGAGTCTCTGTCTCTGAAACCATAA 519 0.4374 MGLVCSNGEEMQKMKNLGSIGSSGRLSAEEYEDEEISKLAISTFQSKEEEIERKKMEVREKVELQLGRAEEETRRLTHIWEELEVLDDPMRKEVAMVRKKIDLANRDLKPLGLNYQKKEKECKEALEAFNEKNKEKAHLVATLVEMLTESERMRMKKLDELCKTIESLSLKP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02098 172 Coils Coil 115 135 - -
Phco6g02098 172 Coils Coil 41 61 - -
Phco6g02098 172 Pfam Transcriptional activator 15 167 IPR007033 -
Phco6g02098 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 9 167 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02098 Phco-Chr6 41417414 41418863 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02156 2 52270867 52273350 Phco6g02098 6 41417414 41418863 ECH
Phco6g02098 6 41417414 41418863 Phco6g02098 6 41417414 41418863 ECH