Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02005 ATGAACTGTCCGAATCCTTTCTGTGCTTCCCCAATAAAGGACAAGTATCATTCTGGTCAAAGTTCCTCATTCTTGATTCTTAGTTGTGATATAAATGGTTTTGCGCGGCTGCTTCTACTGCTTCATCTTTTCCGATTTCTTAACTCTGTATCTGCGCAGAACGAAAACTTTATCACTATGGGGAAAACACGTGGAATGGGAGCTGCCCGCAAGCTGAAGTCCCACCGTAGAAGACAAAGATGGGCCGATAAGTCATACAAAAAGTCTCATCTTGGCAATGAATGGAAGAAGCCTTTTGCAGGTTCTTCCCATGCCAAGGGAATTGTTCTAGAAAAGATAGGTATTGAGGCCAAGCAGCCCAACTCTGCCATTCGTAAATGTGCCAGGGTTCAACTCATCAAAAATGGGAAGAAGATCGCTGCCTTTGTGCCAAACGATGGTTGTTTAAATTACATTGAAGAAAATGATGAGGTTTTGATTGCTGGATTTGGGCGGAAAGGTCACGCCGTGGGTGATATTCCTGGTGTTAGATTCAAGGTTGTAAAGGTTTCTGGGGTGTCTCTTCTTGCTCTCTTCAAGGAGAAGAAGGAGAAGCCAAGGTCGTAA 606 0.4389 MNCPNPFCASPIKDKYHSGQSSSFLILSCDINGFARLLLLLHLFRFLNSVSAQNENFITMGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02005 201 NCBIfam 30S ribosomal protein S12 65 200 IPR005680 GO:0003735|GO:0006412|GO:0015935
Phco2g02005 201 SUPERFAMILY Nucleic acid-binding proteins 79 199 IPR012340 -
Phco2g02005 201 ProSitePatterns Ribosomal protein S12 signature. 118 125 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phco2g02005 201 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 58 201 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phco2g02005 201 Pfam Ribosomal protein S12/S23 90 200 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phco2g02005 201 FunFam 40S ribosomal protein S23 84 201 - -
Phco2g02005 201 Gene3D - 84 201 IPR012340 -
Phco2g02005 201 CDD Ribosomal_S23 85 198 IPR005680 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02005 Phco-Chr2 50754148 50759239 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02005 2 50754148 50759239 Phco2g02004 2 50740653 50744720 ECH
Phco2g02005 2 50754148 50759239 Phco2g02005 2 50754148 50759239 ECH
Phco2g02005 2 50754148 50759239 Phco6g00837 6 8240736 8244289 ECH
Phco2g02005 2 50754148 50759239 Phco6g00837 6 8240736 8244289 PCT