Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02004 ATGACTCTCGCGCCCGGGCGAAGCCCACATGCATCCCGCGCCCTGGCGATGCCCGCATGCCTCTCGCGCCCTGACGATGCTCGCATGTCTCGCGCCCTGGCGATGAAAACACGTGGAATGGGAGCTGCCCGTAAGCTGAAGTCCCACCGTAGAAGACAAAGATGGGCCGACAAGTCATACAAAAAGTCCCATCTGGGAAATGAATGGAAGAAGCCTTTCGCAGGTTCATCTCATGCCAAGGGGATTGTTCTAGAAAAGATAGGTATTGAGGCAAAACAGCCCAACTCTGCCATTCGCAAATGTGCCAGGGTTCAACTCATCAAAAATGGGAAGAAGATTGCTGCCTTTGTGCCAAACGATGGTTGTTTAAATTACATTGAAGAAAATGACGAGGTTTTGATCGCTGGATTTGGTCGGAAAGGTCACGCCGTGGGTGATATTCCTGGTGTTAGATTCAAGGTTGTAAAGGTTTCTGGGGTGTCTCTCCTGGCTCTCTTCAAGGAGAAGAAGGAGAAGCCAAGGTCATAA 528 0.5076 MTLAPGRSPHASRALAMPACLSRPDDARMSRALAMKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02004 175 SUPERFAMILY Nucleic acid-binding proteins 53 173 IPR012340 -
Phco2g02004 175 Gene3D - 58 175 IPR012340 -
Phco2g02004 175 FunFam 40S ribosomal protein S23 58 175 - -
Phco2g02004 175 Pfam Ribosomal protein S12/S23 64 174 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phco2g02004 175 MobiDBLite consensus disorder prediction 39 59 - -
Phco2g02004 175 CDD Ribosomal_S23 59 172 IPR005680 GO:0003735|GO:0006412|GO:0015935
Phco2g02004 175 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 30 175 IPR006032 GO:0003735|GO:0005840|GO:0006412
Phco2g02004 175 MobiDBLite consensus disorder prediction 42 58 - -
Phco2g02004 175 NCBIfam 30S ribosomal protein S12 39 174 IPR005680 GO:0003735|GO:0006412|GO:0015935
Phco2g02004 175 ProSitePatterns Ribosomal protein S12 signature. 92 99 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02004 Phco-Chr2 50740653 50744720 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02005 2 50754148 50759239 Phco2g02004 2 50740653 50744720 ECH
Phco6g00837 6 8240736 8244289 Phco2g02004 2 50740653 50744720 ECH
Phco2g02004 2 50740653 50744720 Phco2g02004 2 50740653 50744720 ECH