Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01473 ATGGGATCCCAAACACAGTCTCAACTTCATGTGGTGGACTTCACTGATGAAGCCATGAAGCCTGGCACCGATGCATGGCTCTCAGCCTGCACTCTTGTCAGGACTGCACTTGAAGACAATGGTTGTTTTGTTGCCCGCTATGATGGAATTGGCAAAGATCTTTGTGATTCTGTTGTATCTGCAATGGAAGACTTGTTTAGCCTCCCAGTGGAAACAAAAACACAAAAAACCAGTGACAAACCTTTCCATGGCTACGTAGGACAAATCTCGTTTCTTCCCTTGCATGAGTCTTTGGGCATTGATGATCCTCTCACCTTACAAGGGTGCCAAAAATTCACCCACATAATGGGGTTGCAGGGAAATCATCGTTTCTGTGAAAGCATGAATGAGTATGCTAAGTTGTTGGGAGAATTAGACCATATGACAAAGAGAATGGTGTTTAAGAGCTATGGTGTGGACATGCAAGGATGCGAGTGTATGATTGAATCAAGCGATTATCTGCTTCGATGCATGAAATATAGGACACCTGATATGAATGAAAAGGATTTGGGAATGCCTACTCATACAGACTTGACCATCGTATCTATAGTTCATCAGCTCAATAATCTGAATGGCTTGGAAGTCAAACTGAAGGATGGAGAATGGATTGGGGTTGATGCCTCTTCATCCTTGTTTCTGGTTATAGCCGGTGACGCATTACATGTGTGGAGTAACGGTAGAATACGACCATGTGAACACAGAGTTACCATGAATGCAACAAAAACCAGATACTCTATGGGACTATTTTCTTTTAGTGGTGAGATTTTGCAGATACCAGATGAGCTAGTGAATGAACAACATCCCTTGCGTTATAAATCAAAATTCGACCATTATGAATACCTTCGTTACTATGAGAAAGAGAAAACCAAAGACTATTGTTCTCGAATCGAAGCCTACTGTGGAATCTCATCCCTATCCTAA 960 0.4198 MGSQTQSQLHVVDFTDEAMKPGTDAWLSACTLVRTALEDNGCFVARYDGIGKDLCDSVVSAMEDLFSLPVETKTQKTSDKPFHGYVGQISFLPLHESLGIDDPLTLQGCQKFTHIMGLQGNHRFCESMNEYAKLLGELDHMTKRMVFKSYGVDMQGCECMIESSDYLLRCMKYRTPDMNEKDLGMPTHTDLTIVSIVHQLNNLNGLEVKLKDGEWIGVDASSSLFLVIAGDALHVWSNGRIRPCEHRVTMNATKTRYSMGLFSFSGEILQIPDELVNEQHPLRYKSKFDHYEYLRYYEKEKTKDYCSRIEAYCGISSLS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01473 319 Gene3D - 1 305 IPR027443 -
Phco2g01473 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
Phco2g01473 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 295 - -
Phco2g01473 319 SUPERFAMILY Clavaminate synthase-like 7 302 - -
Phco2g01473 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 87 IPR026992 -
Phco2g01473 319 Pfam 2OG-Fe(II) oxygenase superfamily 179 264 IPR044861 -
Phco2g01473 319 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01473 Phco-Chr2 44440436 44443958 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01473 2 44440436 44443958 Phco6g00340 6 3241608 3244257 PCT
Phco6g00341 6 3246325 3247579 Phco2g01473 2 44440436 44443958 PCT