Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00340 ATGATGGAAAGCCAAAGTGTGTGTGAATATCCTCTTCCTGTTGTTGACTTCTCCACCGAAAACATGAAGCCTGGCACTGATACATGGCTTGCAGCATGTCAAATGGTGCGGAGAGGCTTTGAGGATCATGGTTGTTTCCTAGCAAACTTTGACAAGGTTACTCCAAAGCTTCTCAACTCCCTTTTCTCTGCAATGGAACAACTCTTTGGTCTCCCTGTGGAAACCAAAAGGAGAAAAACCAGTGAGAAACCCAACCATGGCTACACTGGACAAGTACCCACATCCCCTCTATTCGAATCCTTTGCCATTGAAAATCCATCCAACATTCAAGATTGTCAAAAATTCTCACGCGTTATGTGGCCAACAGGAAATGATCAATTGTGTGAAAGTGTCAACGAGTATGCAAAGTTATTACAAGAGCTGGACCAAACCGTGAAGAGAATGGTCTTTGATAGCTATGGCTTGGACAAGGTGAAATGCGAGACGTTCCTGGAATCAACGGATTATAGTTTTCGAAGCTACAAATATAAGATACCTGCGATGGATGAGAGCAATGTGGGGGTGAATTCTCATACGGACTCAACCTTCATAACCATATTGCATCAGAGGGTAGACGGATTGGAAGTTAAATTGAAAGATGGAGAATGGTTTGGTATTGATGCCTCACCTTTGTTTTGTGTCATGGCTGGTGATGCATTTATGGTGTGGAGCAGTGAAAGGATTCGAGGTTGTGAACATCGTGTGATCCTGAAGTCAAAAGTAACAAGGTACTCCTTAGGGTTGCTTTCATACAGTACTAAGATGGTGCAGACATTGGAGGATTTAGTCGATGAGGAACATCCAATACGCTATAAGCCATTCGACCATTATTCATATGTTGGTTTTCGTTTCACAGAAGAAGCCCTCAAATATACAAGTCGTATCAAAGCTTATTGTGGTGTGGTGTTTGAGGTTATAATTATAGTGCCCAGTGGATGTGTGGATCTGCTGTGGTAG 996 0.4267 MMESQSVCEYPLPVVDFSTENMKPGTDTWLAACQMVRRGFEDHGCFLANFDKVTPKLLNSLFSAMEQLFGLPVETKRRKTSEKPNHGYTGQVPTSPLFESFAIENPSNIQDCQKFSRVMWPTGNDQLCESVNEYAKLLQELDQTVKRMVFDSYGLDKVKCETFLESTDYSFRSYKYKIPAMDESNVGVNSHTDSTFITILHQRVDGLEVKLKDGEWFGIDASPLFCVMAGDAFMVWSSERIRGCEHRVILKSKVTRYSLGLLSYSTKMVQTLEDLVDEEHPIRYKPFDHYSYVGFRFTEEALKYTSRIKAYCGVVFEVIIIVPSGCVDLLW 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00340 331 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 293 - -
Phco6g00340 331 Pfam 2OG-Fe(II) oxygenase superfamily 181 259 IPR044861 -
Phco6g00340 331 Gene3D - 11 316 IPR027443 -
Phco6g00340 331 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 4 301 - -
Phco6g00340 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 90 IPR026992 -
Phco6g00340 331 SUPERFAMILY Clavaminate synthase-like 10 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00340 Phco-Chr6 3241608 3244257 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01473 2 44440436 44443958 Phco6g00340 6 3241608 3244257 PCT
Phco6g00340 6 3241608 3244257 Phco2g01476 2 44474868 44476284 PCT