Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00341 ATGGGGCGTTCTGAACAACAACATCCTATGCTTCCTGTTCTAGATTTCAGAACAGAAGATCTGAAGCCAGGGAGCGATTCCTGGTTTGAAAGATGCAGAAGTGTGCGGCAAGCATTTGAAGAACATGGTTGCTTTATAGCTGTGTATGATAAAGTTTGTGAAGAGATACAAAATGGTGTATTCTGCTCCATGAAGGAGCTGTTCGATCTCTCACTTGAAACTAAGAGAAGAAACACATATGAGGGTGCGCCCTTGAAAGGCTACGTTGGACAACACCCCAAGATTCCCCTCCACCAAAGCATGGGTATAGATCAGGGAACAACCCTAGAGGGAATTCAAAGTTTTGTCCACAAAATGTGGCCAAAAGGCAATGATCAGTTTTGTAAACATATAATTGAGTATGCAAAGGTAGCAGAAGAATTGGATGGGATGGTGGCCAGAATGATATTTGAAAGTTATGGTCTTTCAGAGTACTATGAGTCATATATAGGGTCTACAAGTTATCTCCTTAGGCTTTTGAAACACACAGCACCAGGAGAGGTTGAGCCTCAAGTCGGTCTTGTGGCTCACACTGACAAGAGCTTCACCACAATTCTTCATCAAAATCATGTCAATGCACTCATGGTGGAGACAAGGAATGGTGTCTGGATTGATGTTGATTTCTCTTCACCAAATTCCTTTGTCGTCATGGCTGGTGATGCACTCATGGCTTGGAGCAATGACAGAATACAGTCCCCTAATCATAAGGTTTTGATGATGAATGGGAAGGAAACAAGGTACTCTCTTGGTCTGTTTGCCTTCTACAAAGGAATTCTGAAAGTTCCAGAAGAGCTTATTGATGAAGAACACCCAGTGCAGTATAAGCCCTTTGATCATCTTGGATTACTAAACTTCACTTACAGTGCTAATATGAAAGCTTATTGTGGCGTTTGA 933 0.4212 MGRSEQQHPMLPVLDFRTEDLKPGSDSWFERCRSVRQAFEEHGCFIAVYDKVCEEIQNGVFCSMKELFDLSLETKRRNTYEGAPLKGYVGQHPKIPLHQSMGIDQGTTLEGIQSFVHKMWPKGNDQFCKHIIEYAKVAEELDGMVARMIFESYGLSEYYESYIGSTSYLLRLLKHTAPGEVEPQVGLVAHTDKSFTTILHQNHVNALMVETRNGVWIDVDFSSPNSFVVMAGDALMAWSNDRIQSPNHKVLMMNGKETRYSLGLFAFYKGILKVPEELIDEEHPVQYKPFDHLGLLNFTYSANMKAYCGV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00341 310 Pfam 2OG-Fe(II) oxygenase superfamily 179 266 IPR044861 -
Phco6g00341 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 292 - -
Phco6g00341 310 SUPERFAMILY Clavaminate synthase-like 10 304 - -
Phco6g00341 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 90 IPR026992 -
Phco6g00341 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 268 IPR005123 -
Phco6g00341 310 Gene3D - 1 302 IPR027443 -
Phco6g00341 310 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 4 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00341 Phco-Chr6 3246325 3247579 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01472 2 44412636 44414784 Phco6g00341 6 3246325 3247579 PCT
Phco6g00341 6 3246325 3247579 Phco2g01473 2 44440436 44443958 PCT