Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00663 ATGGAGTTGATGGGGTGTGGAAGGTTTAGGGGGTGCCTTGTTCTTGTGTTATGTACTGTACTGTTGGTGGGTCTAGTGAGTGGGATTGGTGTTAATTGGGGCACACAATTAACACACCCTTTGCCATCGACCACTATGGTAAAAATGCTGAAAGACAATGGTATTCAGAAAGTTAAGCTTTTTGATGCTGACCCTGATATTTTAAATGCTCTAAAGAAGTCTGGGATTCAGGTGATGGTTGGTATACCAAATGAAATGCTCTACACATTGGCCAACAGTATGCAAGCGGCTGAAAGATGGGTTTCCAAGAATGTTTCAGCATATGTCTCATCTGGTGGAGTGGACATCAGGTATGTTGCAGTGGGAAACGAACCTTTCTTGTCAACTTACAATGGTTCATTTGAAGCCACAACACTTCCTGCTCTTCAAAACATCCAAGCAGCTCTTGTGAAAGCCAGTTTAGGCAACCAGGTTAAAGTCACTGTCCCTCTAAATGCTGACGTATATCAGAGTGCACAAGTACCCTCTGATGGTGACTTCAGGCAAGACATCCATGAACTCATGGTGCAGATTGTCAAGTTCTTGAGCCAGAACAATGCTCCGTTTACCGTGAACATCTATCCTTTCATCAGCCTCTATGCAGATCCCAATTTTCCTGTTGATTATGCCTTTTTCAATGGCTTTCAATCCCCCATAAATGACAATGGTAGAATCTATGACAATGTCTTTGATGCCAACCATGATACTCTAGTATGGGCACTGCAGAAAAATGGTTTTGGAAACATGCCTATAGTTGTAGGAGAAGTTGGGTGGCCTACAGATGGAGACAGAAATGCAAACCTTCAATATGCTCAAAGGTTTAACCAAGGCTTCATGTCGCGCTACATGGCAGGAAAGGGGACACCAATGAGGCCTGGTCCTATGGATGCTTACTTGTTCAGTCTCCTAGATGAAGATATCAAAAGCATTCAGCCAGGTAATTTTGAAAGACATTGGGGGTTGTTTTACTATGATGGACAACCCAAGTACCAGCTTAACATAGGATCAAGAACCAATGGCTTAGTAGGTGCAAATGGGATAGCATATCTGGCAAAAAAGTGGTGCATTTTGAAAACCTCAGCAAACCTCAATGATGAGCAAGTGGCACCTAGTGTGTCTTTTGCTTGTCAAAATGCAGATTGTACTAGTCTTGGATATCAAAGTTCATGTGGTAATTTAGATGCTCGTGGTAACATCTCTTTTGCATTCAATAGCTATTACCAAGTGAATGACCAGATTGACAGTGCATGCAAATTCCCTGGCCTTTCTGTTGTGACTGACAAAGATCCTTCCACTGGAGATTGCAAATTCAAAATCATGATCCAGACAGATTCTGCTGGCCTGCATGGGAATGGGAGAATTTGGCATCTCAGAATACTAGTCTTGGCATTTTTGTTTTTCACTCTTCTGTGA 1452 0.4242 MELMGCGRFRGCLVLVLCTVLLVGLVSGIGVNWGTQLTHPLPSTTMVKMLKDNGIQKVKLFDADPDILNALKKSGIQVMVGIPNEMLYTLANSMQAAERWVSKNVSAYVSSGGVDIRYVAVGNEPFLSTYNGSFEATTLPALQNIQAALVKASLGNQVKVTVPLNADVYQSAQVPSDGDFRQDIHELMVQIVKFLSQNNAPFTVNIYPFISLYADPNFPVDYAFFNGFQSPINDNGRIYDNVFDANHDTLVWALQKNGFGNMPIVVGEVGWPTDGDRNANLQYAQRFNQGFMSRYMAGKGTPMRPGPMDAYLFSLLDEDIKSIQPGNFERHWGLFYYDGQPKYQLNIGSRTNGLVGANGIAYLAKKWCILKTSANLNDEQVAPSVSFACQNADCTSLGYQSSCGNLDARGNISFAFNSYYQVNDQIDSACKFPGLSVVTDKDPSTGDCKFKIMIQTDSAGLHGNGRIWHLRILVLAFLFFTLL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00663 483 Gene3D - 362 460 - -
Phco2g00663 483 FunFam Glucan endo-1,3-beta-glucosidase 5 28 353 - -
Phco2g00663 483 Gene3D Glycosidases 28 353 - -
Phco2g00663 483 Pfam X8 domain 366 435 IPR012946 -
Phco2g00663 483 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Phco2g00663 483 SMART X8_cls 366 450 IPR012946 -
Phco2g00663 483 FunFam Glucan endo-1,3-beta-glucosidase 8 362 459 - -
Phco2g00663 483 Pfam Glycosyl hydrolases family 17 29 346 IPR000490 GO:0004553|GO:0005975
Phco2g00663 483 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 439 IPR044965 GO:0004553|GO:0005975
Phco2g00663 483 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00663 Phco-Chr2 6656717 6659446 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00663 2 6656717 6659446 Phco7g01654 7 15989282 15991104 PCT
Phco7g00826 7 6500392 6503459 Phco2g00663 2 6656717 6659446 PCT