Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01654 ATGGCTGAAGTCGAATTTTCTATGTGGGGGCTTTGTTTGATGTTGGTGTTAGCTCATTACCAATTTCAAGATGCCCAAGGTGCAGAGTCTGTACCAGGTCTTGGCATCAATTGGGGTGCATTAGCATCCCACCCTTTGAATCCTAACATTGTGGTAAATATGTTGAAAGACAATGGGTTCAAGAAGGTAAAACTTTTCGATGCAGATCCTTGGACCGTGGGTGCTTTGTCTGGAACAAACATTGAAGTCATGGTGGGAATTCCTAATGATCAATTGAGTAAATTTGCCGGAAGTAGCAGTAGTGCAGAAGATTGGGTGAAAGAAAACATCACCAAACATCTTCATGGTCGTCATGGGACTGTAAACATCAGATACATATCTGTTGGAAATGAACCATTCATGAAAGATTACAAGGGTGCGTATGTGAAGACCACATTCCCAGCAATGCAAAATATTCATAGGGCCATCGACAAGGCTGGTCTTGGAGACAAAGTGAAGGTTACTACAGCTTTAAATGCCGATGTTTATGAATCTCCTTCAAACAAGCCATCAGATGGAGATTTTAGGAGTGACATTCGTGACTCTATACAACAAATACTGAGTTTCCTTCACGAAACGAACTCGCCATTTCTTGTCAACATATACCCTTTCCTTAGTCTCTACCAGAATGACAATTTTCCAGAAGAATTTGCCTTCTTTGACGGTGAAGGAAGAACGGTTGAAGACAACAACGTGCAATATAGCAACGCTTATGACGCAAATTTAGACACCCTTGTTTGGTCATTGAAAAAAGCTGGGTACCCTGACATGAGCATTGTGGTTGGTGAAATTGGATGGCCAACTGATGGTAACAAACATGCTAATAACAAAAATGCAAAAAGGTTCTACCAAGGGCTACTCAAGAATATGGCAAGCAAGCGGGGAACCCCACTTCGCCCTGGAGCCATGGAGATGTATCTATTTTCTCTCACTGATGAGAACATGAAGAGTATTGAACCTGGTAAATTTGAGCGTCACTGGGGAATTTTTGGCTACGATGGAAGGGCTAAGTTTCCAATAGATTTTTCTGGTCAGGGACAAGACAAATGGCCTATAGCAGCCAAAGGGGTTGTGTACCAAGATCGTGTATGGTGTGTTCTAAACAGTGATGTTAAGAACTTGAGTCTTGTACCAAGTGCACTGGACTATGCTTGTGCTGGTGCGGATTGCACAAGCTTAGGATTTGGTTGTTCTTGTGATAATTTAGACCTGGCCACCAATGCTTCATATGCTTTCAACCAGTACTTTCAAACAAGGGACCAAAGTGTTGAGGCTTGTAATTTCAATGGGTTAGCCACTATTGTGAAACAGGATCCATCCAAAGGAAGTTGCATATTCCCTGTAGAAATTGAGAGCAGTGGTGATGTGCTAAGAGCTATTCATACTCTTGGAACCCTTTTGATTGGACTGGCATTGTTTTCTATGACATTTACATAG 1476 0.4194 MAEVEFSMWGLCLMLVLAHYQFQDAQGAESVPGLGINWGALASHPLNPNIVVNMLKDNGFKKVKLFDADPWTVGALSGTNIEVMVGIPNDQLSKFAGSSSSAEDWVKENITKHLHGRHGTVNIRYISVGNEPFMKDYKGAYVKTTFPAMQNIHRAIDKAGLGDKVKVTTALNADVYESPSNKPSDGDFRSDIRDSIQQILSFLHETNSPFLVNIYPFLSLYQNDNFPEEFAFFDGEGRTVEDNNVQYSNAYDANLDTLVWSLKKAGYPDMSIVVGEIGWPTDGNKHANNKNAKRFYQGLLKNMASKRGTPLRPGAMEMYLFSLTDENMKSIEPGKFERHWGIFGYDGRAKFPIDFSGQGQDKWPIAAKGVVYQDRVWCVLNSDVKNLSLVPSALDYACAGADCTSLGFGCSCDNLDLATNASYAFNQYFQTRDQSVEACNFNGLATIVKQDPSKGSCIFPVEIESSGDVLRAIHTLGTLLIGLALFSMTFT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01654 491 Gene3D Glycosidases 33 362 - -
Phco7g01654 491 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 448 IPR044965 GO:0004553|GO:0005975
Phco7g01654 491 Pfam Glycosyl hydrolases family 17 34 355 IPR000490 GO:0004553|GO:0005975
Phco7g01654 491 Gene3D - 370 466 - -
Phco7g01654 491 FunFam Glucan endo-1,3-beta-glucosidase 5 33 361 - -
Phco7g01654 491 SUPERFAMILY (Trans)glycosidases 34 355 IPR017853 -
Phco7g01654 491 SMART X8_cls 376 459 IPR012946 -
Phco7g01654 491 FunFam Glucan endo-1,3-beta-glucosidase 8 372 468 - -
Phco7g01654 491 ProSitePatterns Glycosyl hydrolases family 17 signature. 270 283 IPR000490 GO:0004553|GO:0005975
Phco7g01654 491 Pfam X8 domain 377 446 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01654 Phco-Chr7 15989282 15991104 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01654 7 15989282 15991104 Phco7g01654 7 15989282 15991104 ECH
Phco2g00663 2 6656717 6659446 Phco7g01654 7 15989282 15991104 PCT