Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00826 ATGGGGGGTGGAATGTTTGGAAGGTGTGATTTTTTTGTTGTTGTTGTGTTGGTGGTGTTAGTGGGGTCAGTGAGAGGGATTGGAGTAAACTGGGGGACACAGTCGACACACCCTTTGTCTCCTTCGAAGGTGGTGAAGATGCTGAAGGACAATGGCATTCAGAAGGTGAAGCTTTTTGATGCTGACCCTGGTATCTTGGATGCTCTCAAGAAGTCTGGGATACAGGTCATGGTGGGGATTCCCAATGACATGCTTTATACGCTCGCTAACAGTGTTGAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCCAAACATGTCTCTTCTGGAGGAGTTGACATCAGGTATGTTGCAGTGGGGAATGAACCATTCTTGTCAACATACAATGGCACCTACGAAACCACAACTCTTCCAGCACTTCAAAACATTCAGGCGGCTCTCACAAAGTCCGGTTTGAGCAACCGTGTGAAGGCCACAGTCCCCTTAAATGCTGATGTATACCAAAGCTCCTCAGAAAAGCCATCAGATGGAATTTTCAGACCAGACATCAACAGTGTGATGCTACAGATTGTGAAGTTCTTGAATGACAATGGCGCACCCTTCACAGTGAACATCTACCCTTTCATCAGCCTCTACGCTGACCCCAATTTCCCTGTTGACTATGCCTTCTTTAACGGCTACCAGCCTGCTATTAATGACAACGGAAGAACCTATGACAATGTGTTTGATGCTAACCATGATACCTTAGTGTGGGCACTGCAAAAGAATGGCTTTGGAAACTTGCCTATAATTGTTGGGGAAATTGGATGGCCTACAGATGGAGACAGAAATGCAAACCTTCAATATGCACAACATTTTAACCAAGGTTTCATGTCACGTTACATGTCTGGAAAAGGGACACCAATGAGGCCTAGTCCTATAGATGCTTATTTGTTTAGTCTCATTGATGAAGATGCCAAAAGCATTCAGCCAGGGAACTTTGAGCGTCATTGGGGGATGTTTTACTTGGATGGAAAACCAAAATACCAACTTAATCTTGGGTCAGCACGAGGTAATGGGTTAGTTGGTGCTGATGGGGTTGATCACTTGGCTAAAAAATGGTGCGTTTTGAAACCCTCAGCAAATCTTAATGATGACCAAGTGGCACCTAGTGTGGCCTATGCTTGTCAAAATGCTGATTGCACTAGTCTTGGGTTTGGAACTTCATGTGGGAATTTAGATGTGCATGGTAACATCTCTTATGCTTTTAATAGTTACTATCAGGTAAATGACCAGATGGATAGTGCCTGCAAATTCCCTGGCCTTTCTATGATCACTGACAAGGATCCTTCTGTGGGAGATTGCAAGTTCAGAATCATGATTCAGACAGATTCTGCAGGGCTACATGGAAAAGTTGGATCTCTAACAATAGTGCTGTTTTCATTTCTTCTTTTGCTTTGTTGTAATCTTTTGTTTTGA 1458 0.4355 MGGGMFGRCDFFVVVVLVVLVGSVRGIGVNWGTQSTHPLSPSKVVKMLKDNGIQKVKLFDADPGILDALKKSGIQVMVGIPNDMLYTLANSVEAAEKWVSKNVSKHVSSGGVDIRYVAVGNEPFLSTYNGTYETTTLPALQNIQAALTKSGLSNRVKATVPLNADVYQSSSEKPSDGIFRPDINSVMLQIVKFLNDNGAPFTVNIYPFISLYADPNFPVDYAFFNGYQPAINDNGRTYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQHFNQGFMSRYMSGKGTPMRPSPIDAYLFSLIDEDAKSIQPGNFERHWGMFYLDGKPKYQLNLGSARGNGLVGADGVDHLAKKWCVLKPSANLNDDQVAPSVAYACQNADCTSLGFGTSCGNLDVHGNISYAFNSYYQVNDQMDSACKFPGLSMITDKDPSVGDCKFRIMIQTDSAGLHGKVGSLTIVLFSFLLLLCCNLLF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00826 485 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Phco7g00826 485 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 439 IPR044965 GO:0004553|GO:0005975
Phco7g00826 485 Pfam Glycosyl hydrolases family 17 27 345 IPR000490 GO:0004553|GO:0005975
Phco7g00826 485 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Phco7g00826 485 FunFam Glucan endo-1,3-beta-glucosidase 8 362 459 - -
Phco7g00826 485 Gene3D - 362 459 - -
Phco7g00826 485 Gene3D Glycosidases 25 352 - -
Phco7g00826 485 SMART X8_cls 366 450 IPR012946 -
Phco7g00826 485 FunFam Glucan endo-1,3-beta-glucosidase 5 26 352 - -
Phco7g00826 485 Pfam X8 domain 366 436 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00826 Phco-Chr7 6500392 6503459 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00826 7 6500392 6503459 Phco2g00663 2 6656717 6659446 PCT